DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyc and Ahrr

DIOPT Version :10

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_033774.1 Gene:Ahrr / 11624 MGIID:1333776 Length:701 Species:Mus musculus


Alignment Length:345 Identity:79/345 - (22%)
Similarity:134/345 - (38%) Gaps:90/345 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 KQNHSEIEKRRRDKMNTYINELSSMIPMCFAMQRKLDKLTVLRMAVQHLR-----------GIRG 85
            |.|.|   ||.||::||.::.|:|::|....:..|||||:|||::|.:||           .:..
Mouse    30 KSNPS---KRHRDRLNTELDHLASLLPFSPDIISKLDKLSVLRLSVSYLRVKSFFQALQETCVWS 91

  Fly    86 SGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILYVSDSVSSVLNSTQADLLGQ 150
            :.:|.|...| ||...:.:..|   :|::..||..||..: |.|.|.|.::...|...|.|::.|
Mouse    92 APALSPEEHS-YRGFPVQEGRL---LLESLNGFALVVSAE-GMIFYASATIVDYLGFHQTDVMHQ 151

  Fly   151 SWFDVLHPKDIGKVKEQLS-SLEQCPRERLIDAKTMLPVKTDVPQSLCRLCPGAR---------- 204
            :.:|.:|..|......||. :::  |.:.:............|...|.|...|.:          
Mouse   152 NIYDYIHVDDRQDFCRQLHWAMD--PPQVVFGQSPHADTDNTVLGKLLRAQEGGKGLPSEYSAFL 214

  Fly   205 -RSFFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVIQCTGYLKSWTPIKDEDQD 268
             |.|.||::....|                        |:|  :..:|..|.||.....|.:...
Mouse   215 TRCFICRVRCLLDS------------------------TSG--FLTMQFQGKLKFLFGQKKKTPS 253

  Fly   269 ADSDEQTTNLSCLVAIGRIPPNV-------------RNSTVPASLDN-------------HPNIR 307
            ..:.....:|.|:||  .:.|:|             ..:.:..::|:             ||.:.
Mouse   254 GTALPPRLSLFCIVA--PVLPSVTEMKMKSTFLKAKHRADIVVTMDSRAKAVTSLCESELHPKLN 316

  Fly   308 HVLFISRHSGE-GKFLFIDQ 326
            ::  ..:.:|| |..||..|
Mouse   317 YL--AGKSNGENGISLFRGQ 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 bHLH_SF 31..92 CDD:469605 24/70 (34%)
PAS 111..173 CDD:214512 18/62 (29%)
PAS_11 311..411 CDD:464214 6/17 (35%)
AhrrNP_033774.1 bHLH-PAS_AhRR 27..86 CDD:381441 23/58 (40%)
PAS 108..174 CDD:214512 19/69 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 409..432
Needed for transcriptional repression 555..701
Blue background indicates that the domain is not in the aligned region.

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