DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyc and NCOA2

DIOPT Version :10

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:XP_016868450.1 Gene:NCOA2 / 10499 HGNCID:7669 Length:1533 Species:Homo sapiens


Alignment Length:426 Identity:104/426 - (24%)
Similarity:178/426 - (41%) Gaps:96/426 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ENYDEEKSARTSDENRKQNHSEI--------EKRRRDKMNTYINELSSMIPMCFA-------MQR 65
            ||..:...|.|  ..||:...::        |||.|::.|.||.||:.:|   ||       ...
Human     6 ENTSDPSRAET--RKRKECPDQLGPSPKRNTEKRNREQENKYIEELAELI---FANFNDIDNFNF 65

  Fly    66 KLDKLTVLRMAVQHLRGIRGSGSLHPFNGSDYRPSFLS-------DQE-LKMIILQASEGFLFVV 122
            |.||..:|:..|:.:|.|:........|..:.:.|.:|       |:: |..::|:|.:||.|||
Human    66 KPDKCAILKETVKQIRQIKEQEKAAAANIDEVQKSDVSSTGQGVIDKDALGPMMLEALDGFFFVV 130

  Fly   123 GCDRGRILYVSDSVSSVLNSTQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLP 187
            ..: |.:::||::|:..|...|.:|:.:|.:.:||   :|...|.:              |.:||
Human   131 NLE-GNVVFVSENVTQYLRYNQEELMNKSVYSILH---VGDHTEFV--------------KNLLP 177

  Fly   188 VKTDVPQSLCRLCPGARRS--FFCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTTGHKYRVI 250
             |:.|........|..|.|  |.|||.::...:::  ||...:..:.            .||..:
Human   178 -KSIVNGGSWSGEPPRRNSHTFNCRMLVKPLPDSE--EEGHDNQEAH------------QKYETM 227

  Fly   251 QC--TGYLKSWTPIKDEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRHVLFIS 313
            ||  ....||   ||:|.:|..        |||:.:.|..|......:|:|..         |.:
Human   228 QCFAVSQPKS---IKEEGEDLQ--------SCLICVARRVPMKERPVLPSSES---------FTT 272

  Fly   314 RHSGEGKFLFID---QRATLVIGFLPQEILGTSFYEYFH----NEDIAALMESHKMVMQVPEKVT 371
            |...:||...:|   .||.:..|:   |.|.....:.||    .|.::.....|..|:: .....
Human   273 RQDLQGKITSLDTSTMRAAMKPGW---EDLVRRCIQKFHAQHEGESVSYAKRHHHEVLR-QGLAF 333

  Fly   372 TQVYRFRCKDNSYIQLQSEWRAFKNPWTSEIDYIIA 407
            :|:|||...|.:.:..|::.:..::..|:|...:|:
Human   334 SQIYRFSLSDGTLVAAQTKSKLIRSQTTNEPQLVIS 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 bHLH_SF 31..92 CDD:469605 21/75 (28%)
PAS 111..173 CDD:214512 19/61 (31%)
PAS_11 311..411 CDD:464214 24/104 (23%)
NCOA2XP_016868450.1 bHLH-PAS_NCoA2_SRC2 28..91 CDD:381520 19/65 (29%)
PAS 118..175 CDD:214512 20/74 (27%)
PAS_11 268..378 CDD:464214 24/115 (21%)
NCOA_u2 463..587 CDD:465223
SRC-1 636..709 CDD:462615
DUF4927 731..816 CDD:465083
Nuc_rec_co-act 1071..1115 CDD:462608
DUF1518 1351..1407 CDD:462174
Blue background indicates that the domain is not in the aligned region.

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