Protein Alignment cyc and pasd1

DIOPT Version :9

• Sequence 1: NP_524168.2
• Gene: cyc / 40162
• FlyBaseID: FBgn0023094
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: XP_017951834.2
• Gene: pasd1 / 100486786
• XenbaseID: XB-GENE-1033070
• Length: 862
• Species: Xenopus tropicalis
• Alignment Length: 430
• Identity: 121/430 - (28%)
• Similarity: 193/430 - (44%)
• Gaps: 116/430 - (26%)

  Fly    19 DEEKSARTSDENRKQNHSEIEKRRRDKMNTYINELSSMI-----PMCFAMQRKLDKLTVLRMAVQ 78
            ||::..||...:|.::    ||:|||:.|..|.||.:|:     |:      |:||.|:|:..:.
 Frog     2 DEDEKERTKRASRNKS----EKKRRDQFNVLIKELCTMLQGHGQPL------KMDKSTILQKTID 56

  Fly    79 HLR------------GIRGSGSLHPFNGSDYRPSFLSDQELKMIILQASEGFLFVVGCDRGRILY 131
            .|:            .||          .|::|||||::|...::|:|.:|||..:..| |.|:|
 Frog    57 FLQKQKEITAQTEACEIR----------QDWKPSFLSNEEFTQLMLEALDGFLIALNTD-GIIIY 110

  Fly   132 VSDSVSSVLNSTQADLLGQSWFDVLHPKDIGKVKEQLSSLEQCPRERLIDAKTMLPVKTDVPQSL 196
            |||||||:|....:|::.|:..:.|..::..:|.:.|:|       .::..:.::|...:..:.:
 Frog   111 VSDSVSSLLGHLPSDMVDQNILNFLPEREQAEVLKLLAS-------HILMTEPIIPEYFNNEKQV 168

  Fly   197 CRLCPGARRSF------------------FCRMKLRTASNNQIKEESDTSSSSRSSTKRKSRLTT 243
            ...|..||.|.                  ||. .:.|:|.|..  ||..:.:.||.|
 Frog   169 EFCCHLARGSLDPNEPRMYEFVKFVVDFKFCN-NVPTSSYNGF--ESAVARAFRSGT-------- 222

  Fly   244 GHKYRVIQCTGYLKSWTPIKDEDQDADSDEQTTNLSCLVAIGRIPPNVRNSTVPASLDNHPNIRH 308
                                        :||.    ||||..|:       ..|..|....|:..
 Frog   223 ----------------------------EEQI----CLVATVRL-------VTPQFLKELCNVEE 248

  Fly   309 VL--FISRHSGEGKFLFIDQRATLVIGFLPQEILGTSFYEYFHNEDIAALMESHKMVMQVPEKVT 371
            ..  |.||||.|.||||:|.||..:||:||.|:||||.|:|:|.:|:..|...|:.:||. .|..
 Frog   249 PCEEFTSRHSLEWKFLFLDHRAPPIIGYLPFEVLGTSGYDYYHADDLELLARCHEHLMQC-GKGK 312

  Fly   372 TQVYRFRCKDNSYIQLQSEWRAFKNPWTSEIDYIIAKNSV 411
            :..|||..|...:|.||:.:....:.|.|:.::|:..::|
 Frog   313 SCYYRFLTKGQQWIWLQTHYFITYHQWNSKPEFIVCTHTV 352

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
cyc	NP_524168.2	HLH	31..84	CDD:278439	18/69 (26%)
		PAS	111..212	CDD:279347	30/118 (25%)
		PAS	111..173	CDD:214512	23/61 (38%)
		PAS_11	311..411	CDD:291273	41/99 (41%)
		PAS	311..406	CDD:238075	40/94 (43%)
pasd1	XP_017951834.2	bHLH-PAS_PASD1	1..70	CDD:381579	22/77 (29%)
		PAS	86..>156	CDD:395786	24/77 (31%)
		PAS_11	251..354	CDD:405306	42/103 (41%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	1	1.000