DRSC/TRiP Functional Genomics Resources

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Protein Alignment cyc and ncoa2

DIOPT Version :9

Sequence 1:NP_524168.2 Gene:cyc / 40162 FlyBaseID:FBgn0023094 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_001135631.1 Gene:ncoa2 / 100216190 XenbaseID:XB-GENE-482311 Length:1440 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cycNP_524168.2 HLH 31..84 CDD:278439
PAS 111..212 CDD:279347
PAS 111..173 CDD:214512
PAS_11 311..411 CDD:291273
PAS 311..406 CDD:238075
ncoa2NP_001135631.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..40
bHLH-PAS_NCoA2_SRC2 28..91 CDD:381520
PAS 118..175 CDD:214512
PAS_11 262..371 CDD:373151
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..409
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 453..521
NCOA_u2 456..580 CDD:374708
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 539..571
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 583..656
SRC-1 626..703 CDD:370145
LXXLL motif 1. /evidence=ECO:0000255 631..635
LXXLL motif 2. /evidence=ECO:0000255 684..688
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 704..731
DUF4927 725..812 CDD:374467
LXXLL motif 3. /evidence=ECO:0000255 739..743
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 948..970
PRK10263 <950..>1242 CDD:236669
Nuc_rec_co-act 1066..1111 CDD:312376
LLXXLXXXL motif. /evidence=ECO:0000255 1074..1082
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1287..1306
DUF1518 1288..1344 CDD:369380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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