Protein Alignment Kap-alpha1 and IMPA-6

DIOPT Version :10

• Sequence 1: NP_524167.1
• Gene: Kap-alpha1 / 40160
• FlyBaseID: FBgn0024889
• Length: 543
• Species: Drosophila melanogaster
• Sequence 2: NP_973743.1
• Gene: IMPA-6 / 839517
• AraportID: AT1G02690
• Length: 539
• Species: Arabidopsis thaliana
• Alignment Length: 555
• Identity: 260/555 - (46%)
• Similarity: 341/555 - (61%)
• Gaps: 46/555 - (8%)

  Fly     6 KQRYKNAALDSTEMRRRREEVGIQLRKNKREQQLFKRRNVVLEPATSSTSAGVESNTDNEQQAAD 70
            :.||| .::|:.|.|||||:..:::||||||:.|.|:|.....|:.:|            |...|
plant    13 RNRYK-VSVDADEGRRRREDNMVEIRKNKREENLQKKRREGFNPSMAS------------QPGQD 64

  Fly    71 MHMADSSTGGQNEEAAGSGAQPSVINEEMIQMLFSGRENE----QLEATQKFRKLLSRDPNPPIE 131
            .                |.:.|:....|.||.:.:|..:|    |||||..||:|||.:.||||.
plant    65 F----------------SSSLPTETRLENIQQMIAGVMSEDRDLQLEATASFRRLLSIERNPPIN 113

  Fly   132 EVIQKGIVPQFVTFLRNSANATLQFEAAWTLTNIASGTSQQTKVVIEAGAVPIFIDLLSSPHDDV 196
            ||:|.|:||..|.||.......|||||||.|||||||||:.|:|:|::||||:|:.||||..::|
plant   114 EVVQSGVVPHIVQFLSRDDFTQLQFEAAWALTNIASGTSENTRVIIDSGAVPLFVKLLSSASEEV 178

  Fly   197 QEQAVWALGNIAGDSPMCRDHLLGSGILEPLLHVLSNSDRITMIRNAVWTLSNLCRGKSPPADFA 261
            :|||||||||:|||||.||||:|....:..||.......:::|:|||.|||||.||||..||...
plant   179 REQAVWALGNVAGDSPKCRDHVLSCEAMMSLLAQFHEHSKLSMLRNATWTLSNFCRGKPQPAFEQ 243

  Fly   262 KISHGLPILARLLKYTDADVLSDTCWAIGYLSDGPNDKIQAVIDAGVCRRLVELLLHPQQNVSTA 326
            :....||.|.|||..||.:||:|..||:.|||||.|:|||.||||||..|||:||.||..:|...
plant   244 QTKAALPALERLLHSTDEEVLTDASWALSYLSDGTNEKIQTVIDAGVIPRLVQLLAHPSPSVLIP 308

  Fly   327 ALRAVGNIVTGDDQQTQVILGYNALTCISHLLHST-AETIKKESCWTISNIAAGNREQIQALINA 390
            |||.:||||||||.|||.::...||..:.:||.:| .::||||:|||||||.|||..|||.:..|
plant   309 ALRTIGNIVTGDDIQTQAVISSQALPGLLNLLKNTYKKSIKKEACWTISNITAGNTSQIQEVFQA 373

  Fly   391 NIFPQLMVIMQTAEFKTRKEAAWAITNATSSGTHEQIHYLVQVGCVPPMCDFLTVVDSDIVQVAL 455
            .|...|:.:::..||:.:|||.|||:||||.|.|:||.:||..||:.|:||.|...|..:|.|.|
plant   374 GIIRPLINLLEIGEFEIKKEAVWAISNATSGGNHDQIKFLVSQGCIRPLCDLLPCPDPRVVTVTL 438

  Fly   456 NALENILKAGEKFQT-----RPNPYAITIEECGGLDKIEYLQAHENRDIYHKSFYIIEQYFGNEE 515
            ..||||||.||..:.     ..|.||..||:..||||||.||:|:|.:||.|:..|:|.|:..::
plant   439 EGLENILKVGEAEKNLGNTGNDNLYAQMIEDADGLDKIENLQSHDNNEIYEKAVKILESYWAADD 503

  Fly   516 EDSRVAPVAGTQ-------QFEFDPDNMPSTGFNF 543
            |:..:..|...:       ||.....|.|:.||||
plant   504 EEEDIGGVDAPENVQSSGFQFGNQSGNAPTGGFNF 538

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Kap-alpha1	NP_524167.1	SRP1	1..543	CDD:227396	258/553 (47%)
		armadillo repeat	133..165	CDD:293788	17/31 (55%)
		armadillo repeat	173..209	CDD:293788	22/35 (63%)
		armadillo repeat	215..250	CDD:293788	14/34 (41%)
		armadillo repeat	267..292	CDD:293788	13/24 (54%)
		armadillo repeat	300..336	CDD:293788	22/35 (63%)
		armadillo repeat	342..376	CDD:293788	16/34 (47%)
		armadillo repeat	384..421	CDD:293788	16/36 (44%)
		armadillo repeat	427..461	CDD:293788	15/33 (45%)
IMPA-6	NP_973743.1	SRP1	10..537	CDD:227396	257/552 (47%)
		armadillo repeat	78..103	CDD:293788	11/24 (46%)
		armadillo repeat	115..147	CDD:293788	17/31 (55%)
		armadillo repeat	155..191	CDD:293788	22/35 (63%)
		armadillo repeat	197..231	CDD:293788	13/33 (39%)
		armadillo repeat	249..274	CDD:293788	13/24 (54%)
		armadillo repeat	282..318	CDD:293788	22/35 (63%)
		armadillo repeat	324..359	CDD:293788	16/34 (47%)
		armadillo repeat	367..403	CDD:293788	15/35 (43%)
		armadillo repeat	410..444	CDD:293788	15/33 (45%)