DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kap-alpha1 and IMPA-4

DIOPT Version :9

Sequence 1:NP_524167.1 Gene:Kap-alpha1 / 40160 FlyBaseID:FBgn0024889 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_172398.1 Gene:IMPA-4 / 837448 AraportID:AT1G09270 Length:538 Species:Arabidopsis thaliana


Alignment Length:551 Identity:276/551 - (50%)
Similarity:353/551 - (64%) Gaps:39/551 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KQRYKNAALDSTEMRRRREEVGIQLRKNKREQQLFKRRNVVLEPATSSTSAGVESNTDNEQQAAD 70
            |:.|| ..:|:.|.|||||:..:::||||||..|.|:|.   |.........:.:..|..|.||.
plant    13 KKIYK-TGVDADEARRRREDNLVEIRKNKREDSLLKKRR---EGMMLQQQLPLGAGLDGPQTAAA 73

  Fly    71 MHMADSSTGGQNEEAAGSGAQPSVINEEMIQMLFSGRENEQLEATQKFRKLLSRDPNPPIEEVIQ 135
            :            |....|.      ..|:|.::|.....|||||.:||||||.:.:|||:|||:
plant    74 V------------EKRLEGI------PMMVQGVYSDDPQAQLEATTQFRKLLSIERSPPIDEVIK 120

  Fly   136 KGIVPQFVTFLRNSANATLQFEAAWTLTNIASGTSQQTKVVIEAGAVPIFIDLLSSPHDDVQEQA 200
            .|::|:||.||....:..|||||||.|||:|||||..|:||||.||||||:.||:|..|||:|||
plant   121 AGVIPRFVEFLGRHDHPQLQFEAAWALTNVASGTSDHTRVVIEQGAVPIFVKLLTSASDDVREQA 185

  Fly   201 VWALGNIAGDSPMCRDHLLGSGILEPLLHVLSNSDRITMIRNAVWTLSNLCRGKSPPADFAKISH 265
            ||||||:|||||.||:.:|..|.|||||..|:.:.:::|:|||.|||||.|||| ||..|.::..
plant   186 VWALGNVAGDSPNCRNLVLNYGALEPLLAQLNENSKLSMLRNATWTLSNFCRGK-PPTPFEQVKP 249

  Fly   266 GLPILARLLKYTDADVLSDTCWAIGYLSDGPNDKIQAVIDAGVCRRLVELLLHPQQNVSTAALRA 330
            .||||.:|:...|.:||:|.|||:.||||||||||||||:||||.||||||.|....|...|||.
plant   250 ALPILRQLIYLNDEEVLTDACWALSYLSDGPNDKIQAVIEAGVCPRLVELLGHQSPTVLIPALRT 314

  Fly   331 VGNIVTGDDQQTQVILGYNALTCISHLL-HSTAETIKKESCWTISNIAAGNREQIQALINANIFP 394
            |||||||||.|||.|:....|..:.:|| .:..::||||:|||||||.|||:.||:|::.|.|..
plant   315 VGNIVTGDDSQTQFIIESGVLPHLYNLLTQNHKKSIKKEACWTISNITAGNKLQIEAVVGAGIIL 379

  Fly   395 QLMVIMQTAEFKTRKEAAWAITNATSSGTHEQIHYLVQVGCVPPMCDFLTVVDSDIVQVALNALE 459
            .|:.::|.|||..:|||||||:||||.|:||||.|||..||:.|:||.|...|..||.|.|..||
plant   380 PLVHLLQNAEFDIKKEAAWAISNATSGGSHEQIQYLVTQGCIKPLCDLLICPDPRIVTVCLEGLE 444

  Fly   460 NILKAGEK-----FQTRPNPYAITIEECGGLDKIEYLQAHENRDIYHKSFYIIEQYFGNEEEDSR 519
            ||||.||.     ..:..|.||..|||..||||:|.||:|:|.:||.|:..|:|:|:. |||:.:
plant   445 NILKVGEADKEMGLNSGVNLYAQIIEESDGLDKVENLQSHDNNEIYEKAVKILERYWA-EEEEEQ 508

  Fly   520 VAPVAGT----QQFEFDPDNMPST---GFNF 543
            :....|.    |.|.|  .|.|:.   ||.|
plant   509 ILQDGGNDNSQQAFNF--GNNPAAPVGGFKF 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kap-alpha1NP_524167.1 SRP1 1..543 CDD:227396 275/549 (50%)
IBB 3..116 CDD:280005 33/109 (30%)
ARM 131..252 CDD:237987 74/120 (62%)
armadillo repeat 133..165 CDD:293788 17/31 (55%)
armadillo repeat 173..209 CDD:293788 26/35 (74%)
armadillo repeat 215..250 CDD:293788 17/34 (50%)
ARM 264..378 CDD:237987 68/114 (60%)
armadillo repeat 267..292 CDD:293788 12/24 (50%)
armadillo repeat 300..336 CDD:293788 24/35 (69%)
armadillo repeat 342..376 CDD:293788 15/34 (44%)
ARM 356..461 CDD:237987 58/105 (55%)
armadillo repeat 384..421 CDD:293788 19/36 (53%)
armadillo repeat 427..461 CDD:293788 17/33 (52%)
Arm_3 473..517 CDD:292804 23/43 (53%)
IMPA-4NP_172398.1 SRP1 17..536 CDD:227396 272/544 (50%)
armadillo repeat 81..106 CDD:293788 10/30 (33%)
armadillo repeat 118..150 CDD:293788 17/31 (55%)
armadillo repeat 158..194 CDD:293788 26/35 (74%)
armadillo repeat 200..234 CDD:293788 16/33 (48%)
armadillo repeat 251..276 CDD:293788 12/24 (50%)
armadillo repeat 284..320 CDD:293788 24/35 (69%)
armadillo repeat 326..361 CDD:293788 15/34 (44%)
armadillo repeat 369..405 CDD:293788 18/35 (51%)
armadillo repeat 412..446 CDD:293788 17/33 (52%)
armadillo repeat 466..500 CDD:293788 18/33 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 54 1.000 Domainoid score I4139
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 497 1.000 Inparanoid score I321
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 1 1.000 - - otm2570
orthoMCL 1 0.900 - - OOG6_100442
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X492
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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