DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kap-alpha1 and MOS6

DIOPT Version :9

Sequence 1:NP_524167.1 Gene:Kap-alpha1 / 40160 FlyBaseID:FBgn0024889 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_192124.1 Gene:MOS6 / 827472 AraportID:AT4G02150 Length:531 Species:Arabidopsis thaliana


Alignment Length:548 Identity:278/548 - (50%)
Similarity:358/548 - (65%) Gaps:40/548 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KQRYKNAALDSTEMRRRREEVGIQLRKNKREQQLFKRRNVVLEPATSSTSAGVESNTDNEQQAAD 70
            :.||| .|:|:.|.|||||:..:::||||||:.|.|:|      .|||                 
plant    13 RNRYK-VAVDAEEGRRRREDNLVEIRKNKREENLQKKR------FTSS----------------- 53

  Fly    71 MHMADSSTGGQNEEAAGSGAQPSVINEEMIQMLFSGRENEQLEATQKFRKLLSRDPNPPIEEVIQ 135
              ||..|..||.|:...|..|.......|:..::|...|.|||||...|||||.:.||||.||:|
plant    54 --MAFGSATGQTEQDLSSANQLKDNLPAMVAGIWSEDSNSQLEATNLLRKLLSIEQNPPINEVVQ 116

  Fly   136 KGIVPQFVTFLRNSANATLQFEAAWTLTNIASGTSQQTKVVIEAGAVPIFIDLLSSPHDDVQEQA 200
            .|:||:.|.||.......|||||||.|||||||||:.|.|:||:|||||||.||||..:||:|||
plant   117 SGVVPRVVKFLSRDDFPKLQFEAAWALTNIASGTSENTNVIIESGAVPIFIQLLSSASEDVREQA 181

  Fly   201 VWALGNIAGDSPMCRDHLLGSGILEPLLHVLSNSDRITMIRNAVWTLSNLCRGKSPPADFAKISH 265
            ||||||:|||||.|||.:|..|.:.|||...:.:.:::|:|||.|||||.||||.||| |.:...
plant   182 VWALGNVAGDSPKCRDLVLSYGAMTPLLSQFNENTKLSMLRNATWTLSNFCRGKPPPA-FEQTQP 245

  Fly   266 GLPILARLLKYTDADVLSDTCWAIGYLSDGPNDKIQAVIDAGVCRRLVELLLHPQQNVSTAALRA 330
            .||:|.||::..|.:||:|.|||:.||||..||||||||:|||..||::||.|...:|...|||.
plant   246 ALPVLERLVQSMDEEVLTDACWALSYLSDNSNDKIQAVIEAGVVPRLIQLLGHSSPSVLIPALRT 310

  Fly   331 VGNIVTGDDQQTQVILGYNALTCISHLL-HSTAETIKKESCWTISNIAAGNREQIQALINANIFP 394
            :||||||||.|||::|...||.|:.:|| ::..::||||:|||||||.|||.:||||:|:|.|..
plant   311 IGNIVTGDDLQTQMVLDQQALPCLLNLLKNNYKKSIKKEACWTISNITAGNADQIQAVIDAGIIQ 375

  Fly   395 QLMVIMQTAEFKTRKEAAWAITNATSSGTHEQIHYLVQVGCVPPMCDFLTVVDSDIVQVALNALE 459
            .|:.::|:|||:.:|||||.|:||||.|||:||.::|..||:.|:||.||..|..:|.|.|.|||
plant   376 SLVWVLQSAEFEVKKEAAWGISNATSGGTHDQIKFMVSQGCIKPLCDLLTCPDLKVVTVCLEALE 440

  Fly   460 NILKAGEKFQT-----RPNPYAITIEECGGLDKIEYLQAHENRDIYHKSFYIIEQYF--GNEEE- 516
            |||..||..:.     ..|.||..|:|..||:|||.||:|:|.|||.|:..|:|.::  .|||| 
plant   441 NILVVGEAEKNLGHTGEDNLYAQMIDEAEGLEKIENLQSHDNNDIYDKAVKILETFWTEDNEEEG 505

  Fly   517 -DSRVAPVAGTQQFEFDPDNMPSTGFNF 543
             |...||.:|   |:|...|:|...|||
plant   506 NDENHAPQSG---FQFGSTNVPPGQFNF 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kap-alpha1NP_524167.1 SRP1 1..543 CDD:227396 276/546 (51%)
IBB 3..116 CDD:280005 38/109 (35%)
ARM 131..252 CDD:237987 73/120 (61%)
armadillo repeat 133..165 CDD:293788 17/31 (55%)
armadillo repeat 173..209 CDD:293788 26/35 (74%)
armadillo repeat 215..250 CDD:293788 15/34 (44%)
ARM 264..378 CDD:237987 64/114 (56%)
armadillo repeat 267..292 CDD:293788 12/24 (50%)
armadillo repeat 300..336 CDD:293788 20/35 (57%)
armadillo repeat 342..376 CDD:293788 17/34 (50%)
ARM 356..461 CDD:237987 58/105 (55%)
armadillo repeat 384..421 CDD:293788 20/36 (56%)
armadillo repeat 427..461 CDD:293788 16/33 (48%)
Arm_3 473..517 CDD:292804 24/47 (51%)
MOS6NP_192124.1 SRP1 10..529 CDD:227396 275/545 (50%)
armadillo repeat 77..102 CDD:293788 9/24 (38%)
armadillo repeat 114..146 CDD:293788 17/31 (55%)
armadillo repeat 154..190 CDD:293788 26/35 (74%)
armadillo repeat 196..230 CDD:293788 14/33 (42%)
armadillo repeat 247..272 CDD:293788 12/24 (50%)
armadillo repeat 280..316 CDD:293788 20/35 (57%)
armadillo repeat 322..357 CDD:293788 17/34 (50%)
armadillo repeat 365..401 CDD:293788 19/35 (54%)
armadillo repeat 408..442 CDD:293788 16/33 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 54 1.000 Domainoid score I4139
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 497 1.000 Inparanoid score I321
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 1 1.000 - - otm2570
orthoMCL 1 0.900 - - OOG6_100442
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X492
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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