DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kap-alpha1 and IMPA-1

DIOPT Version :9

Sequence 1:NP_524167.1 Gene:Kap-alpha1 / 40160 FlyBaseID:FBgn0024889 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_187328.1 Gene:IMPA-1 / 819857 AraportID:AT3G06720 Length:532 Species:Arabidopsis thaliana


Alignment Length:552 Identity:271/552 - (49%)
Similarity:359/552 - (65%) Gaps:47/552 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KQRYKNAALDSTEMRRRREEVGIQLRKNKREQQLFKRRN---VVLEPATSSTSAGVESNTDNEQQ 67
            :.||| .|:|:.|.|||||:..:::||:|||:.|.|:|.   ..|:...|:::|.|:...|:   
plant    13 RNRYK-VAVDAEEGRRRREDNMVEIRKSKREESLMKKRREGMQALQGFPSASAASVDKKLDS--- 73

  Fly    68 AADMHMADSSTGGQNEEAAGSGAQPSVINEEMIQMLFSGRENEQLEATQKFRKLLSRDPNPPIEE 132
                                        .::|:..::|.....|||:|.:||||||.:.:|||||
plant    74 ----------------------------LKDMVAGVWSDDPALQLESTTQFRKLLSIERSPPIEE 110

  Fly   133 VIQKGIVPQFVTFLRNSANATLQFEAAWTLTNIASGTSQQTKVVIEAGAVPIFIDLLSSPHDDVQ 197
            ||..|:||:||.||:......:||||||.|||||||||..|||||:..|||||:.||:||.|||:
plant   111 VISAGVVPRFVEFLKKEDYPAIQFEAAWALTNIASGTSDHTKVVIDHNAVPIFVQLLASPSDDVR 175

  Fly   198 EQAVWALGNIAGDSPMCRDHLLGSGILEPLLHVLSNSDRITMIRNAVWTLSNLCRGKSPPADFAK 262
            |||||||||:|||||.|||.:||.|.|.|||:.|:...:::|:|||.|||||.|||| |...|.:
plant   176 EQAVWALGNVAGDSPRCRDLVLGCGALLPLLNQLNEHAKLSMLRNATWTLSNFCRGK-PQPHFDQ 239

  Fly   263 ISHGLPILARLLKYTDADVLSDTCWAIGYLSDGPNDKIQAVIDAGVCRRLVELLLHPQQNVSTAA 327
            :...||.|.||:...|.:||:|.|||:.|||||.|||||.||.|||..:|||||||...:|...|
plant   240 VKPALPALERLIHSDDEEVLTDACWALSYLSDGTNDKIQTVIQAGVVPKLVELLLHHSPSVLIPA 304

  Fly   328 LRAVGNIVTGDDQQTQVILGYNALTCISHLL-HSTAETIKKESCWTISNIAAGNREQIQALINAN 391
            ||.|||||||||.|||.::...||.|:::|| .:..::||||:|||||||.|||::|||.::.||
plant   305 LRTVGNIVTGDDIQTQCVINSGALPCLANLLTQNHKKSIKKEACWTISNITAGNKDQIQTVVEAN 369

  Fly   392 IFPQLMVIMQTAEFKTRKEAAWAITNATSSGTHEQIHYLVQVGCVPPMCDFLTVVDSDIVQVALN 456
            :...|:.::|.|||..:|||||||:||||.|:|:||.|||:.||:.|:||.|...|..|:.|.|.
plant   370 LISPLVSLLQNAEFDIKKEAAWAISNATSGGSHDQIKYLVEQGCIKPLCDLLVCPDPRIITVCLE 434

  Fly   457 ALENILKAGEKFQT-----RPNPYAITIEECGGLDKIEYLQAHENRDIYHKSFYIIEQYFGNEEE 516
            .||||||.||..:.     ..|.||..|::..||:|||.||:|:|.:||.|:..|:|.|:..||:
plant   435 GLENILKVGEAEKNLGHTGDMNYYAQLIDDAEGLEKIENLQSHDNNEIYEKAVKILETYWLEEED 499

  Fly   517 DSRVAP--VAGTQ---QFEFDPDNMPSTGFNF 543
            |....|  |.|:|   ||..:...:||.||||
plant   500 DETQQPPGVDGSQAGFQFGGNQAPVPSGGFNF 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kap-alpha1NP_524167.1 SRP1 1..543 CDD:227396 269/550 (49%)
IBB 3..116 CDD:280005 29/112 (26%)
ARM 131..252 CDD:237987 77/120 (64%)
armadillo repeat 133..165 CDD:293788 17/31 (55%)
armadillo repeat 173..209 CDD:293788 26/35 (74%)
armadillo repeat 215..250 CDD:293788 18/34 (53%)
ARM 264..378 CDD:237987 66/114 (58%)
armadillo repeat 267..292 CDD:293788 12/24 (50%)
armadillo repeat 300..336 CDD:293788 22/35 (63%)
armadillo repeat 342..376 CDD:293788 16/34 (47%)
ARM 356..461 CDD:237987 56/105 (53%)
armadillo repeat 384..421 CDD:293788 19/36 (53%)
armadillo repeat 427..461 CDD:293788 16/33 (48%)
Arm_3 473..517 CDD:292804 21/43 (49%)
IMPA-1NP_187328.1 SRP1 10..530 CDD:227396 268/549 (49%)
armadillo repeat 111..143 CDD:293788 17/31 (55%)
armadillo repeat 151..187 CDD:293788 26/35 (74%)
armadillo repeat 193..227 CDD:293788 17/33 (52%)
armadillo repeat 244..269 CDD:293788 12/24 (50%)
armadillo repeat 277..313 CDD:293788 22/35 (63%)
armadillo repeat 319..354 CDD:293788 16/34 (47%)
armadillo repeat 362..398 CDD:293788 18/35 (51%)
armadillo repeat 405..439 CDD:293788 16/33 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 54 1.000 Domainoid score I4139
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H22472
Inparanoid 1 1.050 497 1.000 Inparanoid score I321
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 1 1.000 - - otm2570
orthoMCL 1 0.900 - - OOG6_100442
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X492
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

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