DRSC/TRiP Functional Genomics Resources

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Protein Alignment Kap-alpha1 and IMPA-7

DIOPT Version :9

Sequence 1:NP_524167.1 Gene:Kap-alpha1 / 40160 FlyBaseID:FBgn0024889 Length:543 Species:Drosophila melanogaster
Sequence 2:NP_001319482.1 Gene:IMPA-7 / 819741 AraportID:AT3G05720 Length:528 Species:Arabidopsis thaliana


Alignment Length:523 Identity:244/523 - (46%)
Similarity:332/523 - (63%) Gaps:55/523 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 YKNAALDSTEMRRRREEVGIQLRKNKREQQLFKRRNVVLEPATSSTSAGVESNTDNEQQAADMHM 73
            || |.:|....|||||:..:::||.|||:.|.|:|...|..:.|                     
plant    14 YK-AVVDGVGGRRRREDDMVEIRKAKREESLLKKRREALPHSPS--------------------- 56

  Fly    74 ADSSTGGQNEEAAGSGAQPSVINEEMIQMLFSGRENEQLEATQKFRKLLSRDP-NPPIEEVIQKG 137
            |||                  :::::|..::|...:..:|||.:.|.||..:. |..:|||||.|
plant    57 ADS------------------LDQKLISCIWSDERDLLIEATTQIRTLLCGEMFNVRVEEVIQAG 103

  Fly   138 IVPQFVTFLRNSANATLQFEAAWTLTNIASGTSQQTKVVIEAGAVPIFIDLLSSPHDDVQEQAVW 202
            :||:||.||....:..|||||||.|||||||||:.|:|||:.|||.|.:.||:||:|.|:||.||
plant   104 LVPRFVEFLTWDDSPQLQFEAAWALTNIASGTSENTEVVIDHGAVAILVRLLNSPYDVVREQVVW 168

  Fly   203 ALGNIAGDSPMCRDHLLGSGILEPLLHVLSNSDRITMIRNAVWTLSNLCRGKSPPADFAKISHGL 267
            |||||:||||.|||.:||...|..||..|::..:::|:.||.|||||||||| |...|.::|..|
plant   169 ALGNISGDSPRCRDIVLGHAALPSLLLQLNHGAKLSMLVNAAWTLSNLCRGK-PQPPFDQVSAAL 232

  Fly   268 PILARLLKYTDADVLSDTCWAIGYLSDGPNDKIQAVIDAGVCRRLVELLLHPQQNVSTAALRAVG 332
            |.||:|::..|.::|:.||||:.|||||.|:||||||:|.||.||:.|.:|...:|.|.|||.:|
plant   233 PALAQLIRLDDKELLAYTCWALVYLSDGSNEKIQAVIEANVCARLIGLSIHRSPSVITPALRTIG 297

  Fly   333 NIVTGDDQQTQVILGYNALTCISHLLH-STAETIKKESCWTISNIAAGNREQIQALINANIFPQL 396
            |||||:|.|||.|:...||.|:.:||. |..:||:||:|||:|||.||.:.||||:.:|:|.|.|
plant   298 NIVTGNDSQTQHIIDLQALPCLVNLLRGSYNKTIRKEACWTVSNITAGCQSQIQAVFDADICPAL 362

  Fly   397 MVIMQTAEFKTRKEAAWAITNATSSGTHEQIHYLVQVGCVPPMCDFLTVVDSDIVQVALNALENI 461
            :.::|.:|...:|||||||.||.:.|:::||.:||:..|:.|:||.||..|:.:|.|.|.||:.|
plant   363 VNLLQNSEGDVKKEAAWAICNAIAGGSYKQIMFLVKQECIKPLCDLLTCSDTQLVMVCLEALKKI 427

  Fly   462 LKAGEKF------------QTRPNPYAITIEECGGLDKIEYLQAHENRDIYHKSFYIIEQYFGNE 514
            ||.||.|            ||..||:|..|||..||:|||.||:|||.|||..:..|:|.|:..|
plant   428 LKVGEVFSSRHAEGIYQCPQTNVNPHAQLIEEAEGLEKIEGLQSHENNDIYETAVKILETYWMEE 492

  Fly   515 EED 517
            ||:
plant   493 EEE 495

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Kap-alpha1NP_524167.1 SRP1 1..543 CDD:227396 244/523 (47%)
IBB 3..116 CDD:280005 26/106 (25%)
ARM 131..252 CDD:237987 73/120 (61%)
armadillo repeat 133..165 CDD:293788 19/31 (61%)
armadillo repeat 173..209 CDD:293788 23/35 (66%)
armadillo repeat 215..250 CDD:293788 15/34 (44%)
ARM 264..378 CDD:237987 63/114 (55%)
armadillo repeat 267..292 CDD:293788 11/24 (46%)
armadillo repeat 300..336 CDD:293788 20/35 (57%)
armadillo repeat 342..376 CDD:293788 17/34 (50%)
ARM 356..461 CDD:237987 51/105 (49%)
armadillo repeat 384..421 CDD:293788 18/36 (50%)
armadillo repeat 427..461 CDD:293788 15/33 (45%)
Arm_3 473..517 CDD:292804 24/43 (56%)
IMPA-7NP_001319482.1 SRP1 24..489 CDD:227396 236/504 (47%)
armadillo repeat 62..86 CDD:293788 6/23 (26%)
armadillo repeat 99..131 CDD:293788 19/31 (61%)
armadillo repeat 139..175 CDD:293788 23/35 (66%)
armadillo repeat 181..216 CDD:293788 15/34 (44%)
armadillo repeat 232..257 CDD:293788 11/24 (46%)
armadillo repeat 265..301 CDD:293788 20/35 (57%)
armadillo repeat 307..342 CDD:293788 17/34 (50%)
armadillo repeat 350..387 CDD:293788 18/36 (50%)
armadillo repeat 393..427 CDD:293788 15/33 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 54 1.000 Domainoid score I4139
eggNOG 1 0.900 - - E1_COG5064
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 497 1.000 Inparanoid score I321
OMA 1 1.010 - - QHG54553
OrthoDB 1 1.010 - - D1111872at2759
OrthoFinder 1 1.000 - - FOG0000157
OrthoInspector 1 1.000 - - otm2570
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23316
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X492
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.940

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