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Protein Alignment Ccdc58 and alms1
DIOPT Version :9
| Sequence 1: | NP_730454.2 |
Gene: | Ccdc58 / 40159 |
FlyBaseID: | FBgn0036909 |
Length: | 136 |
Species: | Drosophila melanogaster |
| Sequence 2: | XP_690375.6 |
Gene: | alms1 / 561882 |
ZFINID: | ZDB-GENE-030131-4837 |
Length: | 2105 |
Species: | Danio rerio |
| Alignment Length: | 149 |
Identity: | 31/149 - (20%) |
| Similarity: | 56/149 - (37%) |
Gaps: | 40/149 - (26%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 18 MRDVDDKIIYALNALPTESFKGQVNSESTCRDLYAKLQESHLARQESIR--SCITISAS------ 74
:|::::::...|...|: |..||.:||.||:.|..|....|.: :.||||.:
Zfish 1182 LRNMENRLSDQLQKAPS-------NPLSTVQDLEAKVHEIALREGFSTKPFTSITISTTRRTPSP 1239
Fly 75 ------------NLKKLREKRETQPDDVDTDNQFRAEQRKL-RVLQAELNVEDIIKDRSYK---- 122
.:..:....||.....|:|.:...|.:.: .....|...|:.|.|::.:
Zfish 1240 QSPPHSPVTGTLKITNVGSANETPAGTKDSDREKETEGQHIDEKKTTEDKQENTITDKAQRMSHI 1304
Fly 123 -------TFNERCR-SYFH 133
|||.:.. |:.|
Zfish 1305 DYNVTSSTFNNKSHLSHIH 1323
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Ccdc58 | NP_730454.2 |
Cid2 |
5..128 |
CDD:286815 |
29/141 (21%) |
| alms1 | XP_690375.6 |
ALMS_motif |
1980..2101 |
CDD:291955 |
|
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
0 | 0.000 |
Not matched by this tool. |
| Domainoid |
0 | 0.000 |
Not matched by this tool. |
| eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4613 |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
0 | 0.000 |
Not matched by this tool. |
| OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
0 | 0.000 |
Not matched by this tool. |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
0 | 0.000 |
Not matched by this tool. |
| RoundUp |
0 | 0.000 |
Not matched by this tool. |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
| ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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