DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and grid1a

DIOPT Version :9

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_021323097.1 Gene:grid1a / 793756 ZFINID:ZDB-GENE-120411-28 Length:1044 Species:Danio rerio


Alignment Length:704 Identity:139/704 - (19%)
Similarity:258/704 - (36%) Gaps:176/704 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IFWHPAFDFRLETVHPMPLIIMDWHRWANRSDQDVYDYKIKEDEFEGKGIPYNDWTLRLTV---- 91
            :|.|.|.:..|.:        .|.| |. .::::|.|.:|.|......|        |:||    
Zfish   238 VFIHQAVETNLAS--------KDSH-WV-YANEEVSDTEIMELVHSALG--------RMTVIRQI 284

  Fly    92 ----------AIERSH------CETFIAFQEQIPEFARYFYHASIYSIWRSLRNRFMFVYTKEFE 140
                      .:..:|      |:....:.:.:...:.|.|.:.:     .|.|.|.    ::.|
Zfish   285 FPLWRDTNIRCMRNNHRISSLLCDPQEGYLQSLEVSSLYLYDSVL-----MLANAFY----RKLE 340

  Fly   141 DKKDSYLSGYIFQDQPNILVITSQYLNSSTFEIKT------NRFVGPRNFNKN--PEPVEFYIL- 196
            |:|...::..      |.:..:::..|.....:.|      :...|..:|..|  ...|:|.|| 
Zfish   341 DRKWHSMASL------NCMRKSTKPWNGGWSMLDTIQKGRISGLTGLMDFRSNGANSHVQFEILG 399

  Fly   197 ----QRFDAKGTK--ATWETQSAMSSKMRNLKGREVVIGIFDYKPFMLLDYEKP----------- 244
                :.| .|..|  |||::...::..:|..:....:.|| ..|...||  |:|           
Zfish   400 TSYSETF-GKDVKRLATWDSDRGLNGSLRENRADHGMQGI-TLKVVTLL--EEPFVMVAENILGQ 460

  Fly   245 PLYYDRFMNTTDVTIDGTD--IQLMLIFCELYNCTIQVDTSEPYDWGDIYLNASGYGLVGMILDR 307
            |..|..|      :||..|  .:::....|:|    ||..::   :|....|.|..|::|.::.:
Zfish   461 PKRYKGF------SIDVLDALAKILGFKYEMY----QVADAK---YGSPQTNGSWNGMIGELIGK 512

  Fly   308 RNDYGVGGMYLWYEAYEYMDMT-HFLGRSGVTCLVPAPNRLISWTLLLRPFQFVLWMCVMLCLLL 371
            |.|..:..:.:..|....:|.: .:|..|....:.....||..:: ||.||...:|.|:...:.:
Zfish   513 RADVAISAITITPERENVVDFSKRYLDYSVGILMTKTEERLNIFS-LLAPFDLAVWACIAAAIPV 576

  Fly   372 ESLALGITRRWE----------HSSVAAGNSWISS--LRFGCISTLKLFVNQSTNYVTSSYALRT 424
            ..:.:.:.||.:          |...:...|:.|:  :.:|.      ||.|......||.|||.
Zfish   577 VGVMVFLLRRVQSVRSQNPPGPHQPASVTTSFQSAIWIVYGA------FVQQGGESFMSSMALRI 635

  Fly   425 VLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFDHKLIWTGTSQAWITTIDERSADPV 489
            .:.:.::..:|:.:.|:..|||.||:..::.|..:.|.|.....|..||.:        .||   
Zfish   636 AMGSWWLFTLIVCSSYTANLAAYLTVSRMDNAIRTFQDLSKQSEINYGTVR--------ESA--- 689

  Fly   490 LLGLMEHYRVYDANLISAFSHTEQMGFVVERLQFGHLGNTELIENDALKRLKLMVDDIYFAFTVA 554
               :.|::||...|.:...|...::...:.:.|    |....:.:.|....|:..|...|.:.:|
Zfish   690 ---VFEYFRVKGTNPLEQDSTFAELWRTINKNQ----GQDNSVTSPAEGIRKVKRDPYAFLWDMA 747

  Fly   555 FVPRLWPHLNAY-----NDFILAWHSSGFDKFWEWKIAAEYMNAHR----QNRIVASEKTNLDIG 610
            .:        .|     :|..|....:|... ..:.:|.::.:.:|    |..:...||.:|||.
Zfish   748 VL--------EYAALTDDDCTLVVTGNGMSS-KGYGLALQHGSPYRDLFSQKILDLQEKGDLDIL 803

  Fly   611 PVK----------------------LGIDNFIGLILLWCFGMICSLLTFLGELW 642
            ..|                      |.:.:|.|:..:...|::.:.|....|.|
Zfish   804 KQKWWPRKGRCDLDKHAEPQTEGRALRLHSFAGVFCILAAGLLLACLVAALESW 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
grid1aXP_021323097.1 Periplasmic_Binding_Protein_Type_1 25..424 CDD:324556 41/219 (19%)
PBP2_iGluR_delta_1 437..809 CDD:270448 90/421 (21%)
DNA_pol3_gamma3 <915..1044 CDD:331207
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591140
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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