DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and grin2aa

DIOPT Version :9

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_021329529.1 Gene:grin2aa / 563297 ZFINID:ZDB-GENE-070424-129 Length:1460 Species:Danio rerio


Alignment Length:667 Identity:135/667 - (20%)
Similarity:229/667 - (34%) Gaps:191/667 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 DVYDYKIKEDEFEGKGIPYNDWTLRLTVAIERSHCETFIAFQEQIPEFARYFY-HASIYSIWRSL 127
            |.:||.::....:|.||        :|.| ..:..|.|    ..|||.....| ......:..|.
Zfish   279 DDWDYPLEARVRDGLGI--------ITTA-AAAMLEEF----GDIPEAKTSCYGQMEKTKLPPSA 330

  Fly   128 RNRFMFVYT---KEFEDKKDSYLSGYIFQDQPNILVITSQYLNSSTFEIKTNRFVGPRNFNKNPE 189
            .:::|...|   |:....:|.|      |..|.::||.   ||      |...:.....:.....
Zfish   331 LHKYMMNVTWDGKDLSFTEDGY------QVHPKLVVIV---LN------KDREWEKMGKWENQSL 380

  Fly   190 PVEFYILQRFDAKGTKATWETQSAMSSKMRNLKGREVVIGIFDYKPFMLLDYEKPPLYYDRFMNT 254
            .:::.:..||::.|...|              ....:.|...:.|||::::      ..:|...|
Zfish   381 TLKYPVWPRFNSFGDAET--------------DDNHLTIVTLEEKPFVIVE------NVERLTGT 425

  Fly   255 ------------TDVTIDGTDIQLMLI---FCELYNCTIQVDTSEPYDWGDIYLNASG------- 297
                        .|.|.:|....:...   ||......|..:....|   |:||..:|       
Zfish   426 CMRNSVPCRKHIKDNTTEGGGTYIKKCCKGFCIDILKKIARNVKFTY---DLYLVTNGKHGKKIN 487

  Fly   298 ---YGLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPAPNRLISWTLLLRPFQF 359
               .|:||.:::::....||.:.:..|..|.:|.:.....:|::.:|...|..:|.:..|.||..
Zfish   488 NVWNGMVGEVVNKKAVMAVGSLTINEERSEVIDFSVPFVETGISVMVSRSNGTVSPSAFLEPFSA 552

  Fly   360 VLW--MCVMLCLLLESLA---------LGITRRWEHSSVAAGNSWISS----LRFGCISTLKLFV 409
            .:|  |.||| ||:.::|         ||..|.........|.|:...    |.:|.:....:.|
Zfish   553 SVWVMMFVML-LLVTAMAVFMFEYISPLGFNRNLAQGKDPHGPSFTMGKAVWLLWGLVFNNSVPV 616

  Fly   410 NQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFDHKLIWTGTS 474
             |:....||.:   .|.|.::...|.|.: |:..|||.:   ..||..|....|.|.|.      
Zfish   617 -QNPKGTTSKF---IVSVWAFFAVIFLAS-YTANLAAFM---IQEEFVDQVTGLSDKKF------ 667

  Fly   475 QAWITTIDERS----ADPVLLGLMEHYRVYDANLISAFSHTEQMGFVVERLQFGHLGNTELIEND 535
                     :|    :.|...|.:.:... :.|:...:....|  ::|:..|.|        .||
Zfish   668 ---------QSPYSYSPPFRFGTVPNGST-ERNIRKNYPDMHQ--YMVKYHQTG--------VND 712

  Fly   536 ALKRLKLMVDD--IYFAFTVAFVPRLWPHLNAYND-------------FILAWHSSGFDKFWEWK 585
            ||..||....|  ||.|..:.::        |..|             |....:.....|...||
Zfish   713 ALVSLKTGKLDAFIYDAAVLNYM--------AGRDEGCKLVTIGSGYIFATTGYGIALQKGSLWK 769

  Fly   586 ------------------IAAEYMNA---HRQNRIVASEKTNLDIGPVKLGIDNFIGLILLWCFG 629
                              :.|:::..   :.:|.:::|:          |.:||..|:..:....
Zfish   770 RPVDLAILAIIGDGEMEELEAQWLTGICHNEKNEVMSSQ----------LDVDNMAGVFYMLATA 824

  Fly   630 MICSLLTFLGE---LWR 643
            |..||:||:.|   .||
Zfish   825 MGLSLITFVWEHLFYWR 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
grin2aaXP_021329529.1 PBP1_iGluR_NMDA_NR2 33..389 CDD:107373 27/137 (20%)
PBP2_iGluR_NMDA_Nr2 400..799 CDD:270436 90/450 (20%)
NMDAR2_C 836..1460 CDD:313729 2/6 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591452
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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