DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and grid1b

DIOPT Version :9

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_009304811.1 Gene:grid1b / 557511 ZFINID:ZDB-GENE-121214-84 Length:1048 Species:Danio rerio


Alignment Length:739 Identity:130/739 - (17%)
Similarity:237/739 - (32%) Gaps:246/739 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 IFWHPAFDFRLETVHPMPLIIMDWHRWANRSDQDVYDYKIKEDEFEGKGIPYNDWTLRLTV---- 91
            :|.|.|.:..|.:        .|.| |. ..::::.|.:|.|......|        |:||    
Zfish   238 VFIHQAVETNLAS--------KDSH-WV-FVNEEISDTEILELAHSSLG--------RMTVVRQI 284

  Fly    92 ----------AIERSH------CETFIAFQEQIPEFARYFYHASIYSIWRSLRNRFMFVYTKEFE 140
                      .:..||      |:....:.:.:.....|.|.:.:     .|.|.|.    ::.|
Zfish   285 FPLWRDSSVSCMRNSHRISSLLCDPQEGYLQSLEVSNLYLYDSVL-----MLANAFY----RKLE 340

  Fly   141 DKKDSYLSGYIFQDQPNILVITSQYLNS--STFE-IKTNRFVGPRNF-----NKNPEPVEFYILQ 197
            |:|...::..      |.:..:::..|.  |..| |:..|..|....     |.:...|:|.|| 
Zfish   341 DRKWHSMASL------NCIRKSTKPWNGGWSMLETIQKGRITGLTGIMDFMENGSNSHVQFEIL- 398

  Fly   198 RFDAKGTK------------ATWETQSAMSSKMR------NLKGREVVIGIFDYKPFMLLDYE-- 242
                 ||.            |||::...::..::      .::|..|.:......||:::...  
Zfish   399 -----GTSFSETFGKDIKRLATWDSVHGLNGSLKESRIENGMQGVTVKVVTLLEDPFVMVAENIL 458

  Fly   243 -KPPLYYDRFMNTTDVTIDGTDIQLMLIFCELYNCTIQVDTSEPYDWGDIYLNASGYGLVGMILD 306
             :|..|            .|..|.::....::......:.......:|....|.|..|::|.:::
Zfish   459 GQPKRY------------KGFSIDVLEALAKILGFKYDIYQVADSKYGSQLSNGSWNGMIGELIN 511

  Fly   307 RRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPAPNRLISWTLLLRPFQFVLWMCVMLCLLL 371
            :|.|..|..:.:..|....:|.:.......|..|...|...|:...|..||...:|.|:...:.:
Zfish   512 KRADLAVSAITITPERENVVDFSKRYMDYSVGILHRKPEEKINIFSLFAPFDLAVWACIAAAIPV 576

  Fly   372 ESLALGITRRWE----------HSSVAAGNS-----WISSLRFGCISTLKLFVNQSTNYVTSSYA 421
            ..:.:.:..|.:          |.:.:..||     ||.   :|.      ||.|..:.|..|.|
Zfish   577 VGVLIFLLTRMQMLRSQNPPGAHHASSMSNSLHSAIWIV---YGA------FVQQGGDSVVGSVA 632

  Fly   422 LRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFDHKLIWTGTSQAWITTIDERSA 486
            ||.|:.:.::..:|:.:.|:..|||.||:..::....:.|.|                   .|..
Zfish   633 LRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNTIRTFQDL-------------------ARQM 678

  Fly   487 DPVLLGLMEHYRVYDANLISAFSHTEQMGFVVERLQFGHLGNTELIENDALKRLKLMVDDIYFAF 551
            | ...|.:....|||                     :.....|..:|.|:               
Zfish   679 D-FAYGTVRDSAVYD---------------------YFKAKGTNPLEQDS--------------- 706

  Fly   552 TVAFVPRLWPHLNAYN--DFILAWHSSGFDK--------FWE----------------------- 583
            |.|   .||..::..|  ||.::..|.|..|        .|:                       
Zfish   707 TYA---ELWRTISKNNGQDFSVSSPSEGIRKAKKGPYAFLWDMAVVEYAALTDDDCTITVSGNSM 768

  Fly   584 ----WKIAAEYMNAHR----QNRIVASEKTNLDIGPVK----------------------LGIDN 618
                :.||.::.:.:|    |..:...||.:||:...|                      |.:.:
Zfish   769 SSKGYGIAMQHGSPYRDLISQKILELQEKGDLDVLKQKWWPRTGRCDLNSHSNAQPDGRSLKLHS 833

  Fly   619 FIGLILLWCFGMICSLLTFLGELW 642
            |.|:..:...|::.:.|....|:|
Zfish   834 FAGVFCILAAGLLLACLVAALEMW 857

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
grid1bXP_009304811.1 PBP1_iGluR_delta_1 25..424 CDD:107387 42/224 (19%)
ANF_receptor 36..400 CDD:279440 37/200 (19%)
Periplasmic_Binding_Protein_Type_2 437..809 CDD:304360 81/451 (18%)
Lig_chan 565..840 CDD:278489 59/342 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591133
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

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