DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and grid2

DIOPT Version :10

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_001004123.1 Gene:grid2 / 448841 ZFINID:ZDB-GENE-040913-1 Length:1009 Species:Danio rerio


Alignment Length:522 Identity:98/522 - (18%)
Similarity:189/522 - (36%) Gaps:117/522 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   184 FNKNPEPVEFYILQRFDAKGTK------------ATWE---------TQSAMSSKMRNLKGREVV 227
            ||.|......:    |:..||.            |||:         |...:.:.||.:..|  |
Zfish   387 FNDNGSNPNIH----FEILGTNYGEDRGRGVSRLATWDPIHGLNGTLTDRKLENNMRGVVLR--V 445

  Fly   228 IGIFDYKPFMLLDYE---KPPLYYDRFMNTTDVTIDGTDIQLMLIFCELYNCTIQVDTSEPYDWG 289
            :.:.: :||:::...   ||..|            .|..|.::...........::..:..:.:|
Zfish   446 VTVLE-EPFVMVSENVLGKPKKY------------QGFSIDVLDALANYLGFKYEIYVAPDHKYG 497

  Fly   290 DIYLNASGYGLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPAPNRLISWTLLL 354
            ....:.:..||:|.::.:|.|.|:..:.:..|....:|.|.......|..|:....|.:.....|
Zfish   498 SQQADGTWNGLIGELVFKRADVGLSALTITPERESVVDFTTRYMDYSVGVLLRKAERTVDMFACL 562

  Fly   355 RPFQFVLWMCVMLCLLLESLALGITRRWEHSSVAAGNSWIS--SLRFGCISTLKL---------- 407
            .||...||.|:...:||....:.:.            :|::  .|..|.:|:..|          
Zfish   563 APFDLSLWACIAGTVLLVGTLVYLL------------NWLNPPRLPMGSVSSTTLYNSMWFVYGS 615

  Fly   408 FVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFDHKLIWTG 472
            ||.|......::.|.|.::...::..:|:.:.|:..|||.||:..:|.:..|.|.|...      
Zfish   616 FVQQGGEVPYTTLATRMMMGVWWLFALIVISSYTANLAAFLTISRIENSIQSLQDLAKQ------ 674

  Fly   473 TSQAWITTIDERSADPVL---LGLMEHYRVYDA--NLIS----AFSHTEQMGFVVERLQFGHLG- 527
            |...:.|.:|....|.|.   :...|...:|..  .:|:    |.::.|:....:.::::|... 
Zfish   675 TDLPYGTVLDSAVYDQVRSKGMNPFERDPMYSQMWRMINRTGGAENNVEESKEGIRKVKYGRFAF 739

  Fly   528 --NTELIENDALKRLKLMVDDIYFAFTVA--FVPRLW--------PHLNAYNDFILAWHSSG-FD 579
              :..::|..|:.      |:....:||:  ...|.:        |:.:.::..||....:| .|
Zfish   740 VWDAAVLEYVAIN------DEDCSLYTVSNNVADRGYGMAMQHGSPYRDIFSQRILELQQNGDMD 798

  Fly   580 ----KFWEWKIAAEYMNAHRQNRIVASEKTNLDIGPVKLGIDNFIGLILLWCFGMICSLLTFLGE 640
                |:|......:..:.      |.:.|:.     ..|.|.:|.|:..:...|::.|.|....|
Zfish   799 ILKLKWWPRDSPCDLYSP------VGTRKSG-----SALDIHSFAGVFFVLAAGVVLSCLIATVE 852

  Fly   641 LW 642
            .|
Zfish   853 TW 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
grid2NP_001004123.1 PBP1_iGluR_delta_2 28..429 CDD:380614 9/45 (20%)
PBP2_iGluR_delta_2 440..806 CDD:270449 74/404 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 989..1009
Blue background indicates that the domain is not in the aligned region.

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