DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and GluRIID

DIOPT Version :9

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_651982.1 Gene:GluRIID / 44483 FlyBaseID:FBgn0028422 Length:902 Species:Drosophila melanogaster


Alignment Length:566 Identity:115/566 - (20%)
Similarity:219/566 - (38%) Gaps:146/566 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 QPNILVITSQYLN----SSTFEIKTNRFVGPRNFNKNPEPVEFYILQRFDAKGTKATWETQSAMS 215
            ||.:|..:.::.|    .|||          ||:.::.|..|..|..|...:|......|...:.
  Fly   324 QPQMLNCSERHDNVQPDGSTF----------RNYMRSLEIKEKTITGRIYFEGNVRKGFTFDVIE 378

  Fly   216 SKMRNLKGREVVIGIFDY-KPFMLLDYEKPPLYYDRFMNTTDV----TIDGTDIQLMLIFCELYN 275
            .:...|    |.:|.::. |.|   ::::||    :.:|..|:    .::.|.|.|:.:..:.|.
  Fly   379 LQTSGL----VKVGTWEEGKDF---EFQRPP----QAVNFNDIDDGSLVNKTFIVLISVATKPYA 432

  Fly   276 CTIQ-VDT------SEPY-------------------DWGDIY-----LNASGYGLVGMILDRRN 309
            ..:: :||      .:.|                   |.|:.|     ...|..|::..|::.|.
  Fly   433 SLVESIDTLIGNNQFQGYGVDLIKELADKLGFNFTFRDGGNDYGSFNKTTNSTSGMLKEIVEGRA 497

  Fly   310 DYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLV----PAPNRLISWTLLLRPFQFVLWMCVMLCLL 370
            |..:..:.:..|..|.:|.:......|:..|.    .||..|.|:   :.||...:|:.:.:..|
  Fly   498 DLAITDLTITSEREEVIDFSIPFMNLGIAILYVKPQKAPPALFSF---MDPFSSEVWLYLGIAYL 559

  Fly   371 LESLALGITRR-----WEH------------SSVAAGNS-WISSLRFGCISTLKLFVNQSTNYVT 417
            ..||...|..|     |::            :.....|| |.         |....:.|.:....
  Fly   560 GVSLCFFIIGRLSPIEWDNPYPCIEEPEELENQFTINNSLWF---------TTGALLQQGSEIAP 615

  Fly   418 SSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFDHK------LIWTGTSQA 476
            .:.:.||:....:...:|:.:.|:..|||.||:.......:|.:.|.|:|      ...||:::.
  Fly   616 KALSTRTISAIWWFFTLIMVSSYTANLAAFLTIENPTSPINSVKDLADNKDDVQYGAKRTGSTRN 680

  Fly   477 WITTIDERSADPVLLGLMEHYRVYDANLISAFSHTEQMGFVVERLQFG----HLGNTELIENDAL 537
            :.:|    |.:|:.:.:.|:...:...|:    ...|.|  |::::.|    .|..:..||.:.:
  Fly   681 FFST----SEEPIYIKMNEYLNAHPEMLM----ENNQQG--VDKVKSGTKYAFLMESTSIEFNTV 735

  Fly   538 KRLKLM-----VDDIYFAFTVAFVPRLWPHLNAYNDFILAWHSSGF-----DKFWEWKIAAEYMN 592
            :...|.     :|:  ..:.:|.| :.||:.:.:|..:|.....|.     :|:|          
  Fly   736 RECNLTKVGDPLDE--KGYGIAMV-KNWPYRDKFNKALLELQEQGVLARLKNKWW---------- 787

  Fly   593 AHRQNRI---VASEKTNLDIGPVKLGIDNFIGLILLWCFGMICSLL 635
                |.:   |.|.|:: |.||.:||:||..|:.::...|.|.|::
  Fly   788 ----NEVGAGVCSAKSD-DDGPSELGVDNLSGIYVVLVIGSIISII 828

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
GluRIIDNP_651982.1 PBP1_iGluR_Kainate 35..397 CDD:107377 20/89 (22%)
ANF_receptor 46..380 CDD:279440 15/65 (23%)
PBP2_iGluR_Kainate 417..788 CDD:270432 76/409 (19%)
Lig_chan 549..819 CDD:278489 62/306 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462844
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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