DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and CG11155

DIOPT Version :9

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_651941.2 Gene:CG11155 / 43822 FlyBaseID:FBgn0039927 Length:910 Species:Drosophila melanogaster


Alignment Length:457 Identity:91/457 - (19%)
Similarity:184/457 - (40%) Gaps:63/457 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 NLKGREVVIGIFDYKPFMLLDYEKPPLYYDRFMNTT-DVTIDGTDIQLMLIFCELYNCTIQVDTS 283
            |:....:|:...:.:|::::..:|         |.| ::..:|..|.|:...........:::..
  Fly   421 NIANITLVVMTREERPYVMVKEDK---------NLTGNLRFEGFCIDLLKAIATQVGFQYKIELV 476

  Fly   284 EPYDWGDIYL--NASGYGLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTCL--VPA- 343
            ....:| :|:  ..|..|:|..:::||.|..|..|.:.|.....:|.|......|:..|  ||. 
  Fly   477 PDNMYG-VYIPETNSWNGIVQELMERRADLAVASMTINYARESVIDFTKPFMNLGIGILFKVPTS 540

  Fly   344 -PNRLISWTLLLRPFQFVLWMCVMLCLLLESLALGITRR-----WEHSSVAAGNSWISSLRFGCI 402
             |.||.|:   :.|....:|:.|:...:|.|.||.:..|     |::.......:.|...:|...
  Fly   541 QPTRLFSF---MNPLAIEIWLYVLAAYILVSFALFVMARFSPYEWKNPHPCYKETDIVENQFSIS 602

  Fly   403 STL----KLFVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRL 463
            ::.    ..|:.|.:.....:.:.|.|....:...:|:.:.|:..|||.||:..:....:|...|
  Fly   603 NSFWFITGTFLRQGSGLNPKATSTRIVGGCWFFFCLIIISSYTANLAAFLTVERMISPIESASDL 667

  Fly   464 FDHKLIWTGTSQAWITTIDERSADPVLLGLMEH-YRVYDANLISAFSHTEQMGFVVERLQFGH-- 525
            .:...|..||.:...|....|.:.   :|:.:. :|..:....:.|..|.:.|  ::|:..|.  
  Fly   668 AEQTEISYGTLEGGSTMTFFRDSK---IGIYQKMWRYMENRKTAVFVKTYEDG--IKRVMEGSYA 727

  Fly   526 --LGNTEL---IENDA-LKRLKLMVDDIYFAFTVAFVPRLWPHLNAYNDFILAWHSSG-----FD 579
              :.:|.|   ::.|. |.::..::|...:...   .|:..|..:..:..||.....|     :|
  Fly   728 FLMESTMLDYAVQRDCNLTQIGGLLDSKGYGIA---TPKGSPWRDKISLAILELQEKGIIQILYD 789

  Fly   580 KFWEWKIAAEYMNAHRQNRIVASEKTNLDIGPVKLGIDNFIGLILLWCFGMICSLLTFLGEL-WR 643
            | | ||...:..|...:::   ..|.|      .||::|..|:.::...|:..:::..:.|. |.
  Fly   790 K-W-WKNTGDVCNRDDKSK---ESKAN------ALGVENIGGVFVVLLCGLALAVVVAIFEFCWN 843

  Fly   644 GQ 645
            .:
  Fly   844 SR 845

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
CG11155NP_651941.2 PBP1_iGluR_Kainate 44..410 CDD:107377
ANF_receptor 61..393 CDD:279440
PBP2_iGluR_Kainate 424..793 CDD:270432 78/391 (20%)
Lig_chan 555..829 CDD:278489 57/292 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463068
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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