DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and Ir40a

DIOPT Version :9

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_610140.4 Gene:Ir40a / 35449 FlyBaseID:FBgn0259683 Length:732 Species:Drosophila melanogaster


Alignment Length:554 Identity:113/554 - (20%)
Similarity:198/554 - (35%) Gaps:174/554 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   220 NLKGREVVIGIFDYKPFMLLDYEKPPLYYDRFMNTTD--------VTIDGTDIQLMLIFCELYNC 276
            |.|||...:.:|...|:..:.|.......|...|:.|        || .|.|.:|:::..:..|.
  Fly   212 NFKGRTFRVPVFHSPPWFWVTYCNNSFEEDEEFNSLDSIEKRKVRVT-GGRDHRLLMLLSKHMNF 275

  Fly   277 TIQVDTSEPYDWGDIYLNASG------------------YGLVGMILDRRNDYGVGGMYLWYEAY 323
            ..:            |:.|.|                  .|.:|::...:.|:.:|.:.|.:|..
  Fly   276 RFK------------YIEAPGRTQGSMRSEDGKDSNDSFTGGIGLLQSGQADFFLGDVGLSWERR 328

  Fly   324 EYMDMTHF-LGRSGVTCLVPAPNRLISWTLLLRPFQFVLWMCVMLCLLLES-LALGI-------T 379
            :.::.:.| |..||... ..||.||.....::|||:..:|..::|.::... :..||       .
  Fly   329 KAIEFSFFTLADSGAFA-THAPRRLNEALAIMRPFKQDIWPHLILTIIFSGPIFYGIIALPYIWR 392

  Fly   380 RRWEHSSVA-AGNSWI---------------------------SSLRFGCI-STLKLFVNQSTNY 415
            |||.:|.|. .|..:|                           ..|...|| .||:||:.||.|.
  Fly   393 RRWANSDVEHLGELYIHMTYLKEITPRLLKLKPRTVLSAHQMPHQLFQKCIWFTLRLFLKQSCNE 457

  Fly   416 VTSSYALRTV-----LVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFDHKLIWTGTSQ 475
            :.:.|..:.:     :.|:|    :|..|||..|.:....|..|...::.||| ...:|..|   
  Fly   458 LHNGYRAKFLTIVYWIAATY----VLADVYSAQLTSQFARPAREPPINTLQRL-QAAMIHDG--- 514

  Fly   476 AWITTIDERSADPVLLGLMEH--------YRVYDANLISAFSHTEQMGFVVERLQFG-------- 524
             :...:::.|:.   |.::|:        |.:....:|:     :..||.::.::.|        
  Fly   515 -YRLYVEKESSS---LEMLENGTELFRQLYALMRQQVIN-----DPQGFFIDSVEAGIKLIAEGG 570

  Fly   525 ----HLGNTEL----IENDALKRLKLMVDDIYFAFTVAFVPRLWPHLNAYNDFILAWHSSG-FDK 580
                .||..|.    ::.......:|. ..:|..::...|....|.|.:.|:.::....|| .||
  Fly   571 EDKAVLGGRETLFFNVQQYGSNNFQLS-QKLYTRYSAVAVQIGCPFLGSLNNVLMQLFESGILDK 634

  Fly   581 FWEWKIAAEYMNAHRQ--------------NRIVASEKTNLD---IGP----------VKLGIDN 618
            .    .||||...:::              |....|...:.|   |.|          :.||:.:
  Fly   635 M----TAAEYAKQYQEVEATRIYKGSVQAKNSEAYSRTESYDSTVISPLNLRMLQGAFIALGVGS 695

  Fly   619 F-IGLIL-------------LWCFGMICSLLTFL 638
            . .|:||             ||   |:||.|.::
  Fly   696 LAAGVILLLEIVFIKLDQARLW---MLCSRLQWI 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
Ir40aNP_610140.4 PBP2_LTTR_substrate 216..338 CDD:330233 23/134 (17%)
Periplasmic_Binding_Protein_Type_2 297..>391 CDD:328725 21/94 (22%)
Periplasmic_Binding_Protein_Type_2 <496..637 CDD:328725 27/158 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462996
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR42643
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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