DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and Ir25a

DIOPT Version :10

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster


Alignment Length:615 Identity:113/615 - (18%)
Similarity:201/615 - (32%) Gaps:201/615 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 DQDVYDYKIKEDEFEGKGIPYNDWTLRLTVAIERSHCETFIA------FQEQIP-----EFARYF 115
            |..|.|:|.|.                |...|:..|..|.||      .:|||.     :...:|
  Fly   187 DSFVMDHKYKS----------------LLQNIQTRHVITAIAKDGKREREEQIEKLRNLDINNFF 235

  Fly   116 YHASIYSI-----------------WRSLRNR------------FMFV----YTKEFEDKKDSYL 147
            ...::.||                 |.::...            .||:    || ::.|:.....
  Fly   236 ILGTLQSIRMVLESVKPAYFERNFAWHAITQNEGEISSQRDNATIMFMKPMAYT-QYRDRLGLLR 299

  Fly   148 SGYIFQDQPNI-------LVITS-----------------QYLNSSTFE--IKTNRFVGPRN-FN 185
            :.|...::|.:       |.:.|                 :|||...|:  ....|.:..|: |.
  Fly   300 TTYNLNEEPQLSSAFYFDLALRSFLTIKEMLQSGAWPKDMEYLNCDDFQGGNTPQRNLDLRDYFT 364

  Fly   186 KNPEPVEF---------------YILQRFD------------AKGTKATWETQSAMSS------- 216
            |..||..:               :...:|:            :..:|:..:..|.::|       
  Fly   365 KITEPTSYGTFDLVTQSTQPFNGHSFMKFEMDINVLQIRGGSSVNSKSIGKWISGLNSELIVKDE 429

  Fly   217 -KMRNLKGREVVIGIFD--YKPFMLLDYEKPPLYYDRFMNTTDVTIDGTDIQLMLIFCELYNCTI 278
             :|:||.. :.|..||.  ..||::.|...|..|            .|..|.|:.....:.:...
  Fly   430 EQMKNLTA-DTVYRIFTVVQAPFIMRDETAPKGY------------KGYCIDLINEIAAIVHFDY 481

  Fly   279 QVDTSEPYDWGDIYLNASGYGLVGMILDRRNDYGVGGMYLWYEAYEYMDMT-HFLGRSGVTCLVP 342
            .:...|...:|::..|....|:|..::|::.|.|:|.|.:..|....:|.| .:....|:|.::.
  Fly   482 TIQEVEDGKFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQ 546

  Fly   343 APNRLISWTLLLRPFQFVLWMCVMLCLLLESLALGITRRWEHSSVAAGNS--------------- 392
            .|:...|....|...:..:|:|::......|..:.|..||...|......               
  Fly   547 RPSSPSSLFKFLTVLETNVWLCILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKE 611

  Fly   393 --WISSLRFGCISTLKLFVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEE 455
              |.      |:::|   ..|.......:.:.|.|....::...|:...|:..|||.||:..|:.
  Fly   612 CLWF------CMTSL---TPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDT 667

  Fly   456 AADSRQRLF-DHKLIWTGTSQAWITTIDERSADPVLLGLMEHYRVYDANLISAFSHTEQMGFVVE 519
            ..:|...|. .:|:::...:.:...|..||                       .|:.|||.:.:.
  Fly   668 PVESLDDLAKQYKILYAPLNGSSAMTYFER-----------------------MSNIEQMFYEIW 709

  Fly   520 RLQFGHLGNTELIEND---ALKRLKLMVDD 546
            :         :|..||   |::|.||.|.|
  Fly   710 K---------DLSLNDSLTAVERSKLAVWD 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 37..418 CDD:380606 39/247 (16%)
PBP2_iGluR_putative 438..836 CDD:270435 69/346 (20%)

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