DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and GRIN2C

DIOPT Version :10

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_054171851.1 Gene:GRIN2C / 2905 HGNCID:4587 Length:1265 Species:Homo sapiens


Alignment Length:632 Identity:124/632 - (19%)
Similarity:213/632 - (33%) Gaps:194/632 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 FYHASIYSIWRSLRNRFMFVYTKEFEDKKDSYLSGYIFQDQPNILVITSQYLNSSTFEIKTNRFV 179
            ||...:...|..          ::|......||.      ||.::||.   ||.........|:.
Human   331 FYRHLLNVTWEG----------RDFSFSPGGYLV------QPTMVVIA---LNRHRLWEMVGRWE 376

  Fly   180 GPRNFNKNPEPVEFYILQRFDAKGTKATWETQSAMSSKMRNLKGREVVIGIFDYKPFMLLDYEKP 244
            ....:.|.|                  .|...||  |....:..|.:.:...:.:||::::...|
Human   377 HGVLYMKYP------------------VWPRYSA--SLQPVVDSRHLTVATLEERPFVIVESPDP 421

  Fly   245 ------PLYYDRFMNT------TDVTIDGTDI-QLMLIFCELYNCTIQVDTSEPYDWG-DIYLNA 295
                  |       ||      ::.|....|: ....:.|:.:...|....:....:. |:||..
Human   422 GTGGCVP-------NTVPCRRQSNHTFSSGDVAPYTKLCCKGFCIDILKKLARVVKFSYDLYLVT 479

  Fly   296 SG----------YGLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPAPNRLISW 350
            :|          .|::|.:..:|.|..:|.:.:..|..|.:|.:.....:|::.:|...|..:|.
Human   480 NGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGTVSP 544

  Fly   351 TLLLRPFQFVLW-MCVMLCLLLESLAL-------------GITRRWEHSSVA--AGNS-WISSLR 398
            :..|.|:...:| |..::||.:.::.:             .:||..:....|  .|.| |:    
Human   545 SAFLEPYSPAVWVMMFVMCLTVVAITVFMFEYFSPVSYNQNLTRGKKSGGPAFTIGKSVWL---- 605

  Fly   399 FGCISTLKLFVNQSTNYV----TSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADS 459
                 ...|..|.|....    |:|..:  |||.::...|.|.: |:..|||.:   ..|:..|:
Human   606 -----LWALVFNNSVPIENPRGTTSKIM--VLVWAFFAVIFLAS-YTANLAAFM---IQEQYIDT 659

  Fly   460 RQRLFDHK-LIWTGTSQAW------ITTIDERSAD---PVLLGLMEHYRVYDANLISAF--SHTE 512
            ...|.|.| |....|..||      .:...:|..|   |...|.:.:... :.|:.|.:  .||.
Human   660 VSGLSDKKSLHLENTGVAWTAFKTFCSDYFQRPQDQYPPFRFGTVPNGST-ERNIRSNYRDMHTH 723

  Fly   513 QMGFVVERLQFGHLGNTELIENDALKRLKLMVDDIYFAFTVAFVPRLWPHLNA--YNDFIL---- 571
            .:.|           |...:| |||..||:       ......|||   .|:|  |:..:|    
Human   724 MVKF-----------NQRSVE-DALTSLKM-------GSEAQPVPR---KLDAFIYDAAVLNYMA 766

  Fly   572 ---------------AWHSSGF------DKFWE----------------WKIAAEYMNAHRQNRI 599
                           .:.::|:      |..|:                .|:...:::...||  
Human   767 GKDEGCKLVTIGSGKVFATTGYGIAMQKDSHWKRAIDLALLQFLGDGETQKLETVWLSGICQN-- 829

  Fly   600 VASEKTNLDIGPVKLGIDNFIGLILLWCFGMICSLLTFLGE---LWR 643
               ||.  ::...||.|||..|:..:....|..:||.|..|   .|:
Human   830 ---EKN--EVMSSKLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWK 871

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
GRIN2CXP_054171851.1 PBP1_iGluR_NMDA_NR2 28..384 CDD:380601 13/71 (18%)
PBP2_iGluR_NMDA_Nr2 400..829 CDD:270436 89/473 (19%)
NMDAR2_C 866..>941 CDD:463148 1/6 (17%)

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