DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and GRIK5

DIOPT Version :10

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:683 Identity:122/683 - (17%)
Similarity:206/683 - (30%) Gaps:256/683 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RLETVHPMPLIIMDWHRWANRSDQDVYDYKIKED------EFEGKGIPYNDWTLRLTVAIERSHC 98
            |.:.:...||.....:.|.:.:....|...::.|      ||..||...| :|||:.....:.|.
Human   323 RSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTN-YTLRILEKSRQGHR 386

  Fly    99 ETFIAFQEQIPEFARYFYHASIYSIWRSLRNRFMFVYTKEFEDKKDSYLSGYIFQDQPNILVITS 163
            |                     ..:|.|.|...|...|.:                     :..|
Human   387 E---------------------IGVWYSNRTLAMNATTLD---------------------INLS 409

  Fly   164 QYLNSSTFEIKTNRFVGPRNFNKNPEPVEFYILQR--FDAKGTKATWETQSAMSSKMRNLKGREV 226
            |.|.:.|..:.|        ..:||     |:::|  |.|                   |.|.| 
Human   410 QTLANKTLVVTT--------ILENP-----YVMRRPNFQA-------------------LSGNE- 441

  Fly   227 VIGIFDYKPFMLLDYEKPPLYYDRFMNTTDVTIDGTDIQLMLIFCELYNCTIQVDTSEPYDWGDI 291
                                   ||        :|..:.::....||.....::...|...:|..
Human   442 -----------------------RF--------EGFCVDMLRELAELLRFRYRLRLVEDGLYGAP 475

  Fly   292 YLNASGYGLVGMILDRRN-DYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPA-PNRLISWTLLL 354
            ..|.|..|:||.:::|:. |..|....:..|..:.:|.:......|::.|... ..|...:...|
Human   476 EPNGSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFL 540

  Fly   355 RPFQFVLWMCVMLCLLLESLALGITRR-----W--EHSSVAA-----------GNS-WISSLRFG 400
            .||...:|:.::|..|..|..|.:..|     |  .|..:.|           ||| |.      
Human   541 DPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWF------ 599

  Fly   401 CISTLKLFVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFD 465
               .:..|:.|.:..:..:.:.|.|....:...:|:.:.|:..|||.||:..:|...:|...|.|
Human   600 ---PVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLAD 661

  Fly   466 HKLIWTGTSQAWIT-------------------------------------TIDERSADPVLLGL 493
            ...|..||..|..|                                     .::.|.|..:...:
Human   662 QTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTM 726

  Fly   494 MEHYRVYDANLISAFSHTEQMGFVVERLQFG---HLGN----------TELIENDALKRLKLMVD 545
            .|::|..:.||       .|:|.:::...:|   .||:          .:|.||:.|:.||    
Human   727 NEYHRRLNCNL-------TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILK---- 780

  Fly   546 DIYFAFTVAFVPRLWPHLNAYNDFILAWHSSGFDKFWEWKIAAEYMNAHRQNRIVASEKTNLDIG 610
                        |.|            |......|          ...||..             
Human   781 ------------RKW------------WEGGRCPK----------EEDHRAK------------- 798

  Fly   611 PVKLGIDNFIGLILLWCFGMICSLLTFLGE-LW 642
              .||::|..|:.::...|:|.::...:.| :|
Human   799 --GLGMENIGGIFIVLICGLIIAVFVAVMEFIW 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 23..401 CDD:380616 20/99 (20%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:473866 86/478 (18%)

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