DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and GRIK4

DIOPT Version :10

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_055434.2 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:612 Identity:112/612 - (18%)
Similarity:207/612 - (33%) Gaps:181/612 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 SIYSIWRSLR--NRFMFVYTKEFEDKKDSYLSGYIFQDQPNILVITSQYLNSSTFEIKTNRFVGP 181
            ::|::..:::  ||     ::|...|..|..|..|:|...:::    .||..    ::.....|.
Human   311 AVYAVVTAVQELNR-----SQEIGVKPLSCGSAQIWQHGTSLM----NYLRM----VELEGLTGH 362

  Fly   182 RNFNKNPEPVEFYI-LQRFDAKGTK--ATWETQSAMSSKMR--------NLKGREVVIGIFDYKP 235
            ..||...:...:.: :.:|...|.:  ..|.....:|....        .|....:|:......|
Human   363 IEFNSKGQRSNYALKILQFTRNGFRQIGQWHVAEGLSMDSHLYASNISDTLFNTTLVVTTILENP 427

  Fly   236 FMLLDYEKPPLY-YDRFMNTTDVTIDGTDIQLMLIFCEL--YNCTIQVDTSEPYDWGDIYLNASG 297
            :::|......:. .||:        :|..:.::....|:  :|..|::.....|  |....|.:.
Human   428 YLMLKGNHQEMEGNDRY--------EGFCVDMLKELAEILRFNYKIRLVGDGVY--GVPEANGTW 482

  Fly   298 YGLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPA-PNRLISWTLLLRPFQFVL 361
            .|:||.::.|:.|..|.|:.:..|..:.:|.:......|::.|... ..|...:...|.||...:
Human   483 TGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPGV 547

  Fly   362 WMCVMLCLLLESLALGITRR-----W--EH-----------SSVAAGNS-WISSLRFGCISTLKL 407
            |:.::|..|..|..|.:..|     |  .|           :..:.||| |.         .:..
Human   548 WLFMLLAYLAVSCVLFLVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWF---------PVGG 603

  Fly   408 FVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFDHKLIWTG 472
            |:.|.:.....:.:.|.|....:...:|:.:.|:..|||.||:..::...:|...|.|...|..|
Human   604 FMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQTAIEYG 668

  Fly   473 T------------------SQAW-----------ITTIDE------RSADPVLL--GLMEHYRVY 500
            |                  .:.|           :.:.:|      .|....||  .:.|:||..
Human   669 TIHGGSSMTFFQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIARVLNSNYAFLLESTMNEYYRQR 733

  Fly   501 DANLISAFSHTEQMGFVVERLQFG-------------HLGNTELIENDALKRLKLMVDDIYFAFT 552
            :.||       .|:|.:::...:|             .|...:|.||:.|:.||           
Human   734 NCNL-------TQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRLEILK----------- 780

  Fly   553 VAFVPRLWPHLNAYNDFILAWHSSGFDKFWE-WKIAAEYMNAHRQNRIVASEKTNLDIGPVKLGI 616
                 |.|                     || .|...|  ..||..               .||:
Human   781 -----RKW---------------------WEGGKCPKE--EDHRAK---------------GLGM 802

  Fly   617 DNFIGLILLWCFGMICSL-LTFLGELW 642
            :|..|:.::...|:|.:: :..|..||
Human   803 ENIGGIFVVLICGLIVAIFMAMLEFLW 829

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
GRIK4NP_055434.2 PBP1_iGluR_Kainate_KA1_2 24..402 CDD:380616 18/103 (17%)
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 78/432 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.

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