DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and GRIA4

DIOPT Version :10

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:NP_000820.4 Gene:GRIA4 / 2893 HGNCID:4574 Length:902 Species:Homo sapiens


Alignment Length:221 Identity:45/221 - (20%)
Similarity:86/221 - (38%) Gaps:34/221 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 GLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPAPNR----LISWTLLLRPFQF 359
            |:||.::..:.:..:..:.:.....|.:|.:......|::.::..|.:    :.|:   |.|..:
Human   484 GMVGELVYGKAEIAIAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSF---LDPLAY 545

  Fly   360 VLWMCVMLCLLLESLALGITRR-----WEHSSVAAGNSWISSL---RFGCIS----TLKLFVNQS 412
            .:|||::...:..|:.|.:..|     |.......|....|..   .||..:    :|..|:.|.
Human   546 EIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEPEDGKEGPSDQPPNEFGIFNSLWFSLGAFMQQG 610

  Fly   413 TNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFDHKLIWTGTSQAW 477
            .:....|.:.|.|....:...:|:.:.|:..|||.||:..:....:|.:.|.....|..||..:.
Human   611 CDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQTEIAYGTLDSG 675

  Fly   478 IT---------TIDE------RSADP 488
            .|         .:.|      |||:|
Human   676 STKEFFRRSKIAVYEKMWTYMRSAEP 701

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
GRIA4NP_000820.4 PBP1_iGluR_AMPA_GluR4 28..400 CDD:380611
PBP2_iGluR_AMPA_GluR4 414..795 CDD:270445 45/221 (20%)
Blue background indicates that the domain is not in the aligned region.

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