DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir76a and Grin2d

DIOPT Version :10

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_063136781.1 Gene:Grin2d / 24412 RGDID:2740 Length:1356 Species:Rattus norvegicus


Alignment Length:556 Identity:113/556 - (20%)
Similarity:181/556 - (32%) Gaps:199/556 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 TWETQSAMSSKMRNLK-------GR---------EVVIGIFDYKPFMLLDYEKPPLYYDRFMNTT 255
            |||...:...:...||       ||         .:.:...:.:||::::...|           
  Rat   394 TWEVVGSWEQQTLRLKYPLWSRYGRFLQPVDDTQHLTVATLEERPFVIVEPADP----------- 447

  Fly   256 DVTIDGTDIQLMLIFCELYNCTIQVDT--SEPYDWG--------------------------DIY 292
               |.||.|:      :...|..|::.  |.|.|..                          |:|
  Rat   448 ---ISGTCIR------DSVPCRSQLNRTHSPPPDAPRPEKRCCKGFCIDILKRLAHTIGFSYDLY 503

  Fly   293 LNASG----------YGLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPAPNRL 347
            |..:|          .|::|.:..:|.|..:|.:.:..|..|.:|.:.....:|::.:|...|..
  Rat   504 LVTNGKHGKKIDGVWNGMIGEVFYQRADMAIGSLTINEERSEIVDFSVPFVETGISVMVARSNGT 568

  Fly   348 ISWTLLLRPFQFVLW-MCVMLCLLL-----------------ESLALGITRRWEHSSVAAGNS-W 393
            :|.:..|.|:...:| |..::||.:                 .|||.|  :|...|:...|.| |
  Rat   569 VSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEYLSPVGYNRSLATG--KRPGGSTFTIGKSIW 631

  Fly   394 ISSLRFGCISTLKLFVNQSTNYV----TSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLE 454
            :         ...|..|.|....    |:|..:  |||.::...|.|.: |:..|||.:   ..|
  Rat   632 L---------LWALVFNNSVPVENPRGTTSKIM--VLVWAFFAVIFLAS-YTANLAAFM---IQE 681

  Fly   455 EAADSRQRLFDHKL---------IWTGTSQAWITTIDERSADPVLLGLMEHYR------------ 498
            |..|:...|.|.|.         :..||.....|..:.||..|.:...|..|.            
  Rat   682 EYVDTVSGLSDRKFQRPQEQYPPLKFGTVPNGSTEKNIRSNYPDMHSYMVRYNQPRVEEALTQLK 746

  Fly   499 -------VYDANLISAFSHTEQ--------MGFVVERLQFG---HLGNTELIENDALKRLKLMVD 545
                   :|||.:::..:..::        .|.|.....:|   |.|:......| |..|:.:.|
  Rat   747 AGKLDAFIYDAAVLNYMARKDEGCKLVTIGSGKVFATTGYGIALHKGSRWKRPID-LALLQFLGD 810

  Fly   546 DIYFAFTVAFVPRLWPHLNAYNDFILAWHSSGFDKFWEWKIAAEYMNAHRQNRIVASEKTNLDIG 610
            |     .:..:.|||.....:||.|                  |.|::                 
  Rat   811 D-----EIEMLERLWLSGICHNDKI------------------EVMSS----------------- 835

  Fly   611 PVKLGIDNFIGLILLWCFGMICSLLTFLGE---LWR 643
              ||.|||..|:..:....|..|||.|..|   .||
  Rat   836 --KLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWR 869

Return to query results.
Submit another query.