Protein Alignment Ir76a and Grin2c

DIOPT Version :9

• Sequence 1: NP_001097647.3
• Gene: Ir76a / 40157
• FlyBaseID: FBgn0260874
• Length: 646
• Species: Drosophila melanogaster
• Sequence 2: NP_036707.3
• Gene: Grin2c / 24411
• RGDID: 2739
• Length: 1250
• Species: Rattus norvegicus
• Alignment Length: 424
• Identity: 88/424 - (20%)
• Similarity: 153/424 - (36%)
• Gaps: 125/424 - (29%)

  Fly   290 DIYLNASG----------YGLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPAP 344
            |:||..:|          .|::|.:..:|.|..:|.:.:..|..|.:|.:.....:|::.:|...
  Rat   487 DLYLVTNGKHGKRVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIIDFSVPFVETGISVMVSRS 551

  Fly   345 NRLISWTLLLRPFQFVLW-MCVMLCLLLESLALGITRRWEHSSVAAGNSWIS--------SLRFG 400
            |..:|.:..|.|:...:| |..::||.:.::.:.:   :|:.|..:.|..::        |...|
  Rat   552 NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFM---FEYFSPVSYNQNLTKGKKPGGPSFTIG 613

  Fly   401 CISTLKLFVNQSTNYV-------TSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAAD 458
             .|...|:.....|.|       |:|..:  |||.::...|.|.: |:..|||.:   ..|:..|
  Rat   614 -KSVWLLWALVFNNSVPIENPRGTTSKIM--VLVWAFFAVIFLAS-YTANLAAFM---IQEQYID 671

  Fly   459 SRQRLFDHKLIWTGTSQAWITTIDERSAD---PVLLGLMEHYRVYDANLISAF--SHTEQMGFVV 518
            :...|.|.|.              :|..|   |...|.:.:... :.|:.|.:  .||..:.|
  Rat   672 TVSGLSDKKF--------------QRPQDQYPPFRFGTVPNGST-ERNIRSNYRDMHTHMVKF-- 719

  Fly   519 ERLQFGHLGNTELIENDALKRLKLMVDD--IYFAFTVAFVPRLWPHLNAYND------------- 568
                     |...:| |||..||:...|  ||.|..:.::        |..|
  Rat   720 ---------NQRSVE-DALTSLKMGKLDAFIYDAAVLNYM--------AGKDEGCKLVTIGSGKV 766

  Fly   569 FILAWHSSGFDKFWEWKIAAEY---------------------MNAHRQNRIVASEKTNLDIGPV 612
            |....:.....|...||.|.:.                     :..:.:|.:::|
  Rat   767 FATTGYGIAMQKDSHWKRAIDLALLQLLGDGETQKLETVWLSGICQNEKNEVMSS---------- 821

  Fly   613 KLGIDNFIGLILLWCFGMICSLLTFLGE---LWR 643
            ||.|||..|:..:....|..:||.|..|   .|:
  Rat   822 KLDIDNMAGVFYMLLVAMGLALLVFAWEHLVYWK 855

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Ir76a	NP_001097647.3	None
Grin2c	NP_036707.3	PBP1_iGluR_NMDA_NR2	41..397	CDD:380601
		PBP2_iGluR_NMDA_Nr2	413..813	CDD:270436	74/370 (20%)
		NMDAR2_C	850..>925	CDD:402274	1/6 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166350135
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930