DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and Grik5

DIOPT Version :9

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_030098003.1 Gene:Grik5 / 14809 MGIID:95818 Length:1003 Species:Mus musculus


Alignment Length:683 Identity:122/683 - (17%)
Similarity:206/683 - (30%) Gaps:256/683 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 RLETVHPMPLIIMDWHRWANRSDQDVYDYKIKED------EFEGKGIPYNDWTLRLTVAIERSHC 98
            |.:.:...||.....:.|.:.:....|...::.|      ||..||...| :|||:.....:.|.
Mouse   346 RSQEIGVKPLACTSANIWPHGTSLMNYLRMVEYDGLTGRVEFNSKGQRTN-YTLRILEKSRQGHR 409

  Fly    99 ETFIAFQEQIPEFARYFYHASIYSIWRSLRNRFMFVYTKEFEDKKDSYLSGYIFQDQPNILVITS 163
            |                     ..:|.|.|...|...|.:                     :..|
Mouse   410 E---------------------IGVWYSNRTLAMNATTLD---------------------INLS 432

  Fly   164 QYLNSSTFEIKTNRFVGPRNFNKNPEPVEFYILQR--FDAKGTKATWETQSAMSSKMRNLKGREV 226
            |.|.:.|..:.|        ..:||     |:::|  |.|                   |.|.| 
Mouse   433 QTLANKTLVVTT--------ILENP-----YVMRRPNFQA-------------------LSGNE- 464

  Fly   227 VIGIFDYKPFMLLDYEKPPLYYDRFMNTTDVTIDGTDIQLMLIFCELYNCTIQVDTSEPYDWGDI 291
                                   ||        :|..:.::....||.....::...|...:|..
Mouse   465 -----------------------RF--------EGFCVDMLRELAELLRFRYRLRLVEDGLYGAP 498

  Fly   292 YLNASGYGLVGMILDRRN-DYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPA-PNRLISWTLLL 354
            ..|.|..|:||.:::|:. |..|....:..|..:.:|.:......|::.|... ..|...:...|
Mouse   499 EPNGSWTGMVGELINRQKADLAVAAFTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFL 563

  Fly   355 RPFQFVLWMCVMLCLLLESLALGITRR-----W--EHSSVAA-----------GNS-WISSLRFG 400
            .||...:|:.::|..|..|..|.:..|     |  .|..:.|           ||| |.      
Mouse   564 DPFSPAVWLFMLLAYLAVSCVLFLAARLSPYEWYNPHPCLRARPHILENQYTLGNSLWF------ 622

  Fly   401 CISTLKLFVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSRQRLFD 465
               .:..|:.|.:..:..:.:.|.|....:...:|:.:.|:..|||.||:..:|...:|...|.|
Mouse   623 ---PVGGFMQQGSEIMPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMEVPVESADDLAD 684

  Fly   466 HKLIWTGTSQAWIT-------------------------------------TIDERSADPVLLGL 493
            ...|..||..|..|                                     .::.|.|..:...:
Mouse   685 QTNIEYGTIHAGSTMTFFQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTM 749

  Fly   494 MEHYRVYDANLISAFSHTEQMGFVVERLQFG---HLGN----------TELIENDALKRLKLMVD 545
            .|::|..:.||       .|:|.:::...:|   .||:          .:|.||:.|:.||    
Mouse   750 NEYHRRLNCNL-------TQIGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEILK---- 803

  Fly   546 DIYFAFTVAFVPRLWPHLNAYNDFILAWHSSGFDKFWEWKIAAEYMNAHRQNRIVASEKTNLDIG 610
                        |.|            |......|          ...||..             
Mouse   804 ------------RKW------------WEGGRCPK----------EEDHRAK------------- 821

  Fly   611 PVKLGIDNFIGLILLWCFGMICSLLTFLGE-LW 642
              .||::|..|:.::...|:|.::...:.| :|
Mouse   822 --GLGMENIGGIFVVLICGLIIAVFVAVMEFIW 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
Grik5XP_030098003.1 PBP1_iGluR_Kainate_KA1_2 23..424 CDD:380616 20/99 (20%)
Periplasmic_Binding_Protein_Type_2 437..808 CDD:419667 86/478 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846641
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

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