DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and grid2

DIOPT Version :9

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_031759030.1 Gene:grid2 / 100487676 XenbaseID:XB-GENE-955038 Length:1007 Species:Xenopus tropicalis


Alignment Length:680 Identity:124/680 - (18%)
Similarity:240/680 - (35%) Gaps:162/680 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LIIMDWHRWANRSDQDVYDYKIKEDEFEGKG----------IPYN--DWTLRLTVAIERSHCETF 101
            |:..|.| |. ..::::.|..::|......|          :|:|  ....|....|..|.|:..
 Frog   251 LVAFDCH-WI-IINEEINDLDVQELVRRSIGRLTIIRQTFPVPHNSSQRCFRGNHRISTSLCDPK 313

  Fly   102 IAFQEQIPEFARYFYHASIYSIWRSLRNRFMFVYTKEFEDKKDSYLSGYIFQDQPNILVITSQYL 166
            ..|.:.:.....|.|...:.     |.|.|    .|:.||:|...::.           :|....
 Frog   314 DPFSQNMEITNMYIYDTVLL-----LANAF----HKKLEDRKWHSMAS-----------LTCIRK 358

  Fly   167 NSSTFE--------IK---TNRFVGPRNFNKNPEPVEFYILQRFDAKGTK------------ATW 208
            ||..::        :|   .:...|..:|:::......|    |:..||.            ..|
 Frog   359 NSKPWQGGRSMLETVKKGGVSGLTGALDFSEDGGNPNIY----FEILGTNYGEELGRGIRKLGFW 419

  Fly   209 ETQSAMSSKM------RNLKGREVVIGIFDYKPFMLLDYE---KPPLYYDRFMNTTDVTIDGTDI 264
            ...:.::..:      .|::|..:.:.....:||:::...   ||..|            .|..|
 Frog   420 NPVTGLNGSLTDRKLENNMRGVVLRVATVLEEPFVMVSENVLGKPKKY------------QGFSI 472

  Fly   265 QLMLIFCELYNCTIQVDTSEPYDWGDIYLNASGYGLVGMILDRRNDYGVGGMYLWYEAYEYMDMT 329
            .::...........::..:..:.:|....:.|..||:|.:|.:|.|.|:..:.:..:....:|.|
 Frog   473 DVLDALSSYLGFKYEIYVASDHKYGSPQADGSWNGLIGELLLKRADMGISALTITPDRENVVDFT 537

  Fly   330 HFLGRSGVTCLVPAPNRLISWTLLLRPFQFVLWMCVMLCLLLESLALGITRRWEHSSVAAGNSWI 394
            .......|..|:....:.:.....|.||...||.|:...:||..|.:.:.            :|:
 Frog   538 TRYMDYSVGVLLRKAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLL------------NWL 590

  Fly   395 S--SLRFGCISTLKL----------FVNQSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAI 447
            :  .|:.|.:::..|          ||.|......::.|.|.::.|.::..:|:.:.|:..|||.
 Frog   591 NPPRLQMGSMTSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAF 655

  Fly   448 LTLPTLEEAADSRQRLFDHKLIWTGTSQAWITTIDERSADPVLLGLMEHYRVYDANLISAFSHTE 512
            ||:..:|.:..|.|.|...      |...:.|..|.        .:.||.||...|.....|...
 Frog   656 LTISRIESSIQSLQDLSRQ------TDIPYGTVFDS--------AVYEHVRVKGMNPFERDSMYS 706

  Fly   513 QMGFVVERLQFGHLGNTELIENDALKRLKLMVDDIY-FAFTVAFVPRLWPHLNAYNDFILAWHSS 576
            ||..::.|.. |...|.:    ::|:.::.:....| |.:..|.:..:     |.||...::::.
 Frog   707 QMWRMINRSN-GSENNVQ----ESLEGIQKVKHGNYAFVWDAAVLEYI-----AINDQDCSFYTV 761

  Fly   577 G---FDKFWEWKIAAEYMNAHR----QNRIVASEKTNLDIGPVK--------------------- 613
            |   .|:  .:.||.::.:.:|    |..:...:..::||...|                     
 Frog   762 GNTIADR--GYGIALQHGSPYRDIFSQRILELQQNGDMDILKHKWWPRNGQCELHSSMDTKQKGS 824

  Fly   614 -LGIDNFIGLILLWCFGMICSLLTFLGELW 642
             |.|.:|.|:..:...|::.|....:.|.|
 Frog   825 SLDIKSFSGVFCILAAGIVLSCFIAMVETW 854

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
grid2XP_031759030.1 Periplasmic_Binding_Protein_type1 28..429 CDD:415822 34/203 (17%)
PBP2_iGluR_delta_2 440..806 CDD:270449 81/415 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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