DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76a and LOC100149482

DIOPT Version :9

Sequence 1:NP_001097647.3 Gene:Ir76a / 40157 FlyBaseID:FBgn0260874 Length:646 Species:Drosophila melanogaster
Sequence 2:XP_009290417.1 Gene:LOC100149482 / 100149482 -ID:- Length:1959 Species:Danio rerio


Alignment Length:420 Identity:93/420 - (22%)
Similarity:153/420 - (36%) Gaps:117/420 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   290 DIYLNASG----------YGLVGMILDRRNDYGVGGMYLWYEAYEYMDMTHFLGRSGVTCLVPAP 344
            |:||..:|          .|:||.::.:|.|..:|.:.:..|..|.:|.:.....:|::.:|...
Zfish   505 DLYLVTNGKHGKKIDGVWNGMVGEVVYKRADMAIGSLTINEERSEVVDFSVPFVETGISVMVSRS 569

  Fly   345 NRLISWTLLLRPFQFVLW-MCVMLCLLLESLA---------LGITRRWEHSSVAAGNSWISSLRF 399
            |..:|.:..|.|:...:| |..::||.:.::.         :|..|..:....|.|:.:......
Zfish   570 NGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFIFEFFSPVGYNRSLQSGKKAGGSKFTIGKSI 634

  Fly   400 GCISTLKLFVN----QSTNYVTSSYALRTVLVASYMIDIILTTVYSGGLAAILTLPTLEEAADSR 460
            ..:..| :|.|    ::....||..   .|||.::...|.|.: |:..|||.:   ..||..|:.
Zfish   635 WLLWAL-VFNNSVPVENPKGTTSKI---MVLVWAFFAVIFLAS-YTANLAAFM---IQEEYIDTV 691

  Fly   461 QRLFDHKL---------IWTGTSQAWITTIDERSADPVLLGLMEHYR------------------ 498
            ..|.|.|.         :..||.....|..:.||..|.:...|..|.                  
Zfish   692 SGLSDKKFQHPTEQYPPLKFGTVPNGSTEKNIRSNYPDMHQYMVKYNQKSVEDAISHLKTGKLDA 756

  Fly   499 -VYDANLISAFSHTEQMGFVVERLQFGHLGNT-----ELIENDALKR------LKLMVDDIYFAF 551
             :|||.:::..:..:: |..|..:..|.:..|     .||:|...||      |:|:.||     
Zfish   757 FIYDAAVLNYMARKDE-GCKVMTIGSGKVFATTGYGIALIKNSRWKRPLDLALLQLVGDD----- 815

  Fly   552 TVAFVPRLWPHLNAYNDFILAWHSSGFDKFWEWKIAAEYMNAHRQNRIVASEKTNLDIGPVKLGI 616
            .:..:.|||.....:||.|                  |.|::                   ||.|
Zfish   816 EIEMLERLWLSGICHNDKI------------------EVMSS-------------------KLDI 843

  Fly   617 DNFIGLILLWCFGMICSLLTFLGE---LWR 643
            ||..|:..:....|..|||.|..|   .||
Zfish   844 DNMAGVFYMLLVAMGLSLLVFAWEHLVYWR 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76aNP_001097647.3 None
LOC100149482XP_009290417.1 PBP1_iGluR_NMDA_NR2 44..421 CDD:107373
PBP2_iGluR_NMDA_Nr2 433..831 CDD:270436 74/339 (22%)
HisJ <487..>570 CDD:223904 15/64 (23%)
Lig_chan 585..857 CDD:278489 66/322 (20%)
NMDAR2_C 868..>900 CDD:287527 2/6 (33%)
FAM76 <1763..>1856 CDD:292665
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170591660
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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