DRSC/TRiP Functional Genomics Resources

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Protein Alignment SREBP and SPT

DIOPT Version :9

Sequence 1:NP_001262064.1 Gene:SREBP / 40155 FlyBaseID:FBgn0261283 Length:1113 Species:Drosophila melanogaster
Sequence 2:NP_568010.1 Gene:SPT / 829847 AraportID:AT4G36930 Length:373 Species:Arabidopsis thaliana


Alignment Length:466 Identity:91/466 - (19%)
Similarity:149/466 - (31%) Gaps:146/466 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    64 TQQTQSVDQQPQSVEQQPHVKSEHSSPVH---IKEELHQQQQQSPLLVY-------KPDPLIATS 118
            :|:.:..:::.:.:..:..:.|..||.|:   |...||.....|..:..       :..||  .|
plant     3 SQREEREEKKQRVMGDKKLISSSSSSSVYDTRINHHLHHPPSSSDEISQFLRHIFDRSSPL--PS 65

  Fly   119 YNCPQQQPT-----GLLKAAQPTA------TIHHMDAQRMPPNTAVYPPSLGSSFVYQSMSPPTS 172
            |..|....|     |:..:..|.|      ..||      ||:.:|........|....:...:.
plant    66 YYSPATTTTTASLIGVHGSGDPHADNSRSLVSHH------PPSDSVLMSKRVGDFSEVLIGGGSG 124

  Fly   173 PV------ESANQNVNVMQPVAATPAPASAPLPQQSYPQPFITYNSKAGMTSDEAMYFLLQPTVA 231
            ..      .....|.||....:.|...:|:.....:....:...:.:.|    ||        |.
plant   125 SAAACFGFSGGGNNNNVQGNSSGTRVSSSSVGASGNETDEYDCESEEGG----EA--------VV 177

  Fly   232 SPTPSPPVAPPPTSTGSRASKVRVAPLAPSPAAMEVQGKVPINRVQPKVKEVKRSAHNAIERRYR 296
            ...||....|...|:..|.....|                                ||..|:|.|
plant   178 DEAPSSKSGPSSRSSSKRCRAAEV--------------------------------HNLSEKRRR 210

  Fly   297 TSINDKINELKNLVVGEQAKLNKSAVLRKSIDKIRDLQRQNHDLKAELQRLQRELMARDGSKVKD 361
            :.||:|:..|::|:.... |.:|:::|.::|:.::.||.|           .:.|..|:|..:..
plant   211 SRINEKMKALQSLIPNSN-KTDKASMLDEAIEYLKQLQLQ-----------VQMLTMRNGINLHP 263

  Fly   362 LLQLGT--RPGRASKKRRESSQTFTTDAGLTPPRSDESDPSLSPMHSDISLPPSPYGGSTASCS- 423
            |...||  .|.:.|:.|              ||.: .:||.|:..:...|...:|...:|.:.| 
plant   264 LCLPGTTLHPLQLSQIR--------------PPEA-TNDPLLNHTNQFASTSNAPEMINTVASSY 313

  Fly   424 ----SGSSSSNEEPLV---VPSSMRGMATHSRLGLCMFMFAILAVNPFKTFLQRGH--------- 472
                |..|.....||:   |..|..|..||.||.:                   ||         
plant   314 ALEPSIRSHFGPFPLLTSPVEMSREGGLTHPRLNI-------------------GHSNANITGEQ 359

  Fly   473 --YDSNDDLGD 481
              :|...||.|
plant   360 ALFDGQPDLKD 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SREBPNP_001262064.1 HLH 281..338 CDD:238036 17/56 (30%)
OmpH <289..>364 CDD:281871 20/74 (27%)
SPTNP_568010.1 HLH 203..251 CDD:197674 16/59 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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