DRSC/TRiP Functional Genomics Resources

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Protein Alignment SREBP and tfe3b

DIOPT Version :9

Sequence 1:NP_001262064.1 Gene:SREBP / 40155 FlyBaseID:FBgn0261283 Length:1113 Species:Drosophila melanogaster
Sequence 2:NP_001038531.1 Gene:tfe3b / 564996 ZFINID:ZDB-GENE-010919-3 Length:451 Species:Danio rerio


Alignment Length:472 Identity:98/472 - (20%)
Similarity:155/472 - (32%) Gaps:169/472 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 KEELHQQQQQSPLLVYKP---DPLIATSY------NCPQQQPTGLLKA----AQPTATIHHMDAQ 145
            ::|..:.|||:.:...:|   .|.|:.|.      ..|.|.|..:||.    ..|| ..|...||
Zfish    18 EQERREAQQQASVAQLRPADTTPAISVSLPPMAARPPPAQVPVEVLKVQTHLENPT-KYHIQQAQ 81

  Fly   146 RM----------------------PPNTAVYPPSLGSSFVYQSMSPPTSPVESANQNVN------ 182
            |.                      |...:...|.:|.|    :.|.|.||:...|...|      
Zfish    82 RQQVKEYLSTTLGNKVATQTLGVSPVPHSASAPEMGPS----ASSAPNSPMAHLNLGSNKEEMDD 142

  Fly   183 VMQPVAATPA----------PASAPLPQQSYPQPFITYNSKAGMTSDEAMYFLLQPTVASPTPSP 237
            |:..:.:..:          .:...||..........||| .|||:         ||:......|
Zfish   143 VIDDIISLESSFNDDILSLIDSGLQLPNTLPGNLLDVYNS-PGMTT---------PTITVSNSCP 197

  Fly   238 PVAPPPTSTGSRASKVRVAPLAPSPAAMEVQGKVPINRVQPK--VKE-VKRSAHNAIERRYRTSI 299
            ...|                    ....|..|.|.:...:.:  :|| .|:..||.||||.|.:|
Zfish   198 ADLP--------------------NIKREYTGNVIVIETEARAFMKERQKKDNHNLIERRRRFNI 242

  Fly   300 NDKINELKNLV---VGEQAKLNKSAVLRKSIDKIRDLQRQNHDLKAELQRLQRELMARDGS---K 358
            ||:|.||..|:   ...:.:.||..:|:.|:|.||.||::....| |::..|::|...:.:   :
Zfish   243 NDRIKELGALIPKSTDPEMRWNKGTILKASVDYIRKLQKEQQRAK-EIEMRQKKLEQSNQALILR 306

  Fly   359 VKDL--------LQLGTRPGRASKKRRESSQTFTTDAGL-------------------------- 389
            :::|        |.....||..::.....:|....:|.:                          
Zfish   307 IQELEIQARHHGLNATVSPGLNTEASFIQNQLLQPNASMQAGVGDGQPQSHLNMDGAMAQTSPSP 371

  Fly   390 ---TPPRSD------------------ESDPSLSPMHSDISL----------------PPSPYGG 417
               .||...                  |.|...|.::.|:.|                |.||  |
Zfish   372 FLSVPPSGSPAAVAVSGPLHLETFSFTELDEHASDLYPDVGLSDILMDDVRGSDVLFSPMSP--G 434

  Fly   418 STASCSSGSSSSNEEPL 434
            ::.:.|.|||.:.|:.|
Zfish   435 ASKTSSQGSSINMEDDL 451

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SREBPNP_001262064.1 HLH 281..338 CDD:238036 26/60 (43%)
OmpH <289..>364 CDD:281871 27/88 (31%)
tfe3bNP_001038531.1 MITF_TFEB_C_3_N 4..144 CDD:292573 29/130 (22%)
HLH 224..284 CDD:238036 25/59 (42%)
DUF3371 312..450 CDD:288684 21/139 (15%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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