DRSC/TRiP Functional Genomics Resources

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Protein Alignment SREBP and srebf2

DIOPT Version :9

Sequence 1:NP_001262064.1 Gene:SREBP / 40155 FlyBaseID:FBgn0261283 Length:1113 Species:Drosophila melanogaster
Sequence 2:XP_012816036.1 Gene:srebf2 / 100144677 XenbaseID:XB-GENE-1011360 Length:1096 Species:Xenopus tropicalis


Alignment Length:1177 Identity:346/1177 - (29%)
Similarity:541/1177 - (45%) Gaps:186/1177 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LMNLIDAPLDESMDLFKAEDVFEPFDADLHSDMLDIILNDMDLAPTQMYNMLLDEPRTHTQQTQS 69
            ::..:...:.:..|||: |.:.:.:..:          |.|:.|..:.||....:|  :|..|  
 Frog    26 MLQFVSNQVGDFPDLFE-EQLCQSYQGN----------NAMETALPKAYNQAPQQP--YTTST-- 75

  Fly    70 VDQQPQSVEQQPHVKSEHSSPVHIKEELHQQQQQSPLLVYKPDPLIATSYNCPQQQPTGLL---- 130
              .|||::            ||....:: ..|:.:|||  :|.|:|.:|.....||.|.:|    
 Frog    76 --PQPQTL------------PVKAPSQV-TPQRTAPLL--QPRPVIQSSPQPQLQQQTVMLTPNF 123

  Fly   131 KAAQPTATIHH-MDAQRMPPNTAVYPPSLGSSFVYQSMSPPTSP------------VESANQNVN 182
            ..|..|..|.. :..|....:..|..|.:.|....|.|.|.|..            .::||..:.
 Frog   124 STAPQTRIIQQPLIYQNAATSFQVLQPPVQSLMTTQQMQPVTIQQQVQTVQAQRVLTQAANGTIQ 188

  Fly   183 VMQPVAATPAPASAPLPQQSYP---QPFITYNSKAGMTSDEAMYFLLQPTVASP------TPSPP 238
            .:.|  ||......|..|| .|   ||.|.......:|:.:|....:..|:.:|      ||...
 Frog   189 TLTP--ATTVQTVTPQVQQ-VPVLVQPQIIKTESLVLTAVKADGSPVMTTMQNPAITTLATPIQT 250

  Fly   239 VA-PPPTSTGSRASKVRVAPLAPSPAAMEVQGKVPINRV-----QPKV-KE-VKRSAHNAIERRY 295
            .| ..||..||..:.:...|:      |..|.|:||.:|     ||:| || .:|:.||.||:||
 Frog   251 TALQVPTLMGSNGTILTTMPV------MMGQEKMPIKQVPGSLKQPEVPKEGERRTTHNIIEKRY 309

  Fly   296 RTSINDKINELKNLVVGEQAKLNKSAVLRKSIDKIRDLQRQNHDLKAELQRLQRELMARDGSKVK 360
            |:||||||.|||:||:|..||::||.||:|:||.|:.||:.|       |:|::|.||       
 Frog   310 RSSINDKIIELKDLVMGTDAKMHKSGVLKKAIDYIKYLQQVN-------QKLRQENMA------- 360

  Fly   361 DLLQLGTRPGRASK--------------KRRESSQTFTTDAGLTPPRSDESDPSLSPMHSDISLP 411
              |:|..:..:..|              |..|.:|....   ::||.||...|::...:|..|.|
 Frog   361 --LKLANQKNKYLKGIDLSSLVDTSIGMKMDEFNQNILM---MSPPASDSGSPAVFSPYSVDSEP 420

  Fly   412 PSPYGGSTASCSSGSSSSNEEPLVVPSSMRGMATHSRLGLCMFMFAILAVNPFKTFL--QRGHYD 474
            .||.        .......:|| ..|:.: ||...||:.||...|..|:.||..:.|  :.|.|.
 Frog   421 GSPL--------LDDEKVKDEP-DSPTGL-GMMDRSRMLLCTMTFLCLSFNPLTSLLHSESGQYT 475

  Fly   475 SNDDLGDMSGQRRILSYDVEGEGFAVWQQSSW---------IWLLNFTLMLGCLVKLLVYGDP-- 528
            .....|  :|:..:   .:|..||    ..||         :||:|..::|...:|||::|:|  
 Frog   476 ERVQHG--TGRTML---GIETSGF----YGSWFDWLIPTLILWLVNGVIVLSVFMKLLIHGEPVT 531

  Fly   529 QLDAQTDA-YCQHRQRADFYFSQGQSSQAYAGYLNCLHMFGLSLPASRLECYLQTTWQFLRFLFH 592
            :|.:::.. :.:||::||...::|....|......||.:.|.||||||.:.....:|..:|....
 Frog   532 RLHSRSSVKFWRHRKQADLDLAKGDFGAAAINLQTCLCVLGRSLPASRFDLACSLSWNIIRCSLQ 596

  Fly   593 RLWLGRVLSRRSGGLFSNAASRKQALASARELALLFNRLNQLQLTGN-GSRGDMNGIMMALFASN 656
            ::.|.|.|.:.|.|....|..:.:|..|||:.||::::|:||.|||. .|..:.:|:.:||.|.|
 Frog   597 KISLVRWLLKHSPGYCKKAEFQDEATTSARDAALVYHKLHQLHLTGKLPSNWNCSGLNLALCAVN 661

  Fly   657 MAEVAHNLLTPRETICIHVMTALRMKRSAPKWLQQLFARYYMSRARQECGLTRATEQT--QELRW 719
            :||.|.|.::|.....||:.||::||.|.|...:.|.| |::.     |....::|::  ..:||
 Frog   662 LAECAGNKISPNLLAEIHLTTAIQMKTSFPSRFRFLTA-YFLG-----CAQNASSEESLPDPVRW 720

  Fly   720 AFTAYGYRYCATHVFTYDLSDSGEQDGFFTRLRNPCDPAAHVIKQYREHLLFKAIQCLVGAGHKS 784
            .....|..:.....:..   .|..:|..:|..|||.||...:.:.:.|.||.||:..:  |..::
 Frog   721 LAHPLGKYFFINSNWAL---KSVTKDSLYTSTRNPADPVTQIHRAFCESLLEKAMYTM--AKPET 780

  Fly   785 GGLPTSSVSGEAEQLQQ--------QQHSGTIVSNVLKYTSLLKDTLWADEDERDTNVVWWADVL 841
            ...|....|.|..:.|:        ....|.|.|..|..:|.:...        |....||..|.
 Frog   781 SKAPPEEESCEFSRAQEYLKLLSGFADSVGNIASLPLSGSSPMSSA--------DPICRWWYSVS 837

  Fly   842 ETAVHWLLGEDTLAEQLYGRIKQMPTQLQQCGENDHLPKALHAVLRAKMILLKNNGNALDKSLKQ 906
            ..|:.||.|:|::.:..:..::::|..|.   .::.|.||:..:.||....:....:....|...
 Frog   838 SMAIGWLQGDDSVVKSHFAEVERIPKLLD---SDNPLVKAVIHMCRAMQAAVLGKCDGPQSSFYH 899

  Fly   907 LVNILCDESSVELQECLTVNRITDAKGIKLLFQLLTCDWLLETRTALWELEHMNMEDDG-FYQVP 970
                 |:::|..|...|.::.......:..:.|||.||.||..||:||:.:..:....| ....|
 Frog   900 -----CEKASTFLWNSLNMSSTGSYANLNKVVQLLICDLLLSLRTSLWQKQSSSSPAAGESIHAP 959

  Fly   971 GEVLEKFQTDLNSLRNIVENIPNAQSRIYLYEAVCRLMAGASPCPTQQLLDRSLRSRNAHSSIFC 1035
            ..||..||.||:|||.:......|..:::|:||..||||||||..|.|||..||:.|.|.::   
 Frog   960 TSVLTGFQRDLSSLRRLALTFKPAHCKLFLHEATVRLMAGASPTRTHQLLQHSLQKRTALAN--- 1021

  Fly  1036 GSKDRRQQNFVGGERERASAMYVACKYLPPALLSSPGERAGMLAEAAKTLEKVGDKRKLKECYQL 1100
               .:...:.:.|:||||:|:.:||::||.:.|||||:||.||||||:|||||||:|...:|.|:
 Frog  1022 ---KQGDLDSLPGQRERATAILLACRHLPLSFLSSPGQRAVMLAEAARTLEKVGDRRSYHDCQQM 1083

  Fly  1101 MKSLGNG 1107
            |..|..|
 Frog  1084 MVKLSGG 1090

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SREBPNP_001262064.1 HLH 281..338 CDD:238036 34/57 (60%)
OmpH <289..>364 CDD:281871 36/74 (49%)
srebf2XP_012816036.1 bHLHzip_SREBP2 293..369 CDD:381492 42/91 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 350 1.000 Domainoid score I1018
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 430 1.000 Inparanoid score I1693
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167699at33208
OrthoFinder 1 1.000 - - FOG0001476
OrthoInspector 1 1.000 - - otm48521
Panther 1 1.100 - - LDO PTHR46062
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1708
SonicParanoid 1 1.000 - - X2374
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.190

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