DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42637 and odr-1

DIOPT Version :10

Sequence 1:NP_524165.2 Gene:CG42637 / 40153 FlyBaseID:FBgn0261360 Length:1525 Species:Drosophila melanogaster
Sequence 2:NP_001362115.1 Gene:odr-1 / 181479 WormBaseID:WBGene00003848 Length:1047 Species:Caenorhabditis elegans


Alignment Length:1152 Identity:298/1152 - (25%)
Similarity:482/1152 - (41%) Gaps:275/1152 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   145 VVKSLLALLRYYAWNK----FSILYEDVW--------SPVADLLKD-QATKRNMTINHKQSFI-D 195
            ::||||.::..:...:    ..::..|.|        |.|||...: |.|.:::.||.:.... |
 Worm     1 MLKSLLIIVIVFLHRELCDGIQLILFDNWPSAQNVCASAVADATANGQCTTKSIQINQQHGCSGD 65

  Fly   196 NRVKCCEQMLDCCRSGYWYQLVQNTMNRTRIYVFLGAANSLVDFMSSMETAGLF----------- 249
            |.||         .:.|....|.:..:....:||:|...:     :.:.|.|.|           
 Worm    66 NSVK---------SASYAINAVASRTSGELDFVFVGPTCT-----TDIRTIGDFAEIWKSPVIGY 116

  Fly   250 -----ARGEYMVIFV------------DMMVYSEREAEKY-LRRVDQITFMSNCHSTEN----FN 292
                 |||...:..|            :.:|:..:|.|:. :..|..:..:.|..|..|    :|
 Worm   117 EPVFEARGVQELTSVINVAQFSVGGVAETLVFLMKELEQVEITLVGSVKVLPNGLSLSNDLRSYN 181

  Fly   293 QMARSLLVVASTPPTKDYIQFTKQVQK-----------------YS------------------- 321
            ::..|..:.......::.:.:||..||                 ||                   
 Worm   182 EIMNSFKIREYVEVDENDVDWTKVDQKIKRGARMIVVCADFYDIYSAFYNIGIRSLSGFRFIIVV 246

  Fly   322 --SKPP-------------------------------FNL---EIPRLFVESNFSKFISIYAAYL 350
              :|||                               |::   .||.| .:..|:.|:.||.|  
 Worm   247 ILNKPPDEILNQPNVKNLLYGSNAFIISPLQEQYSDAFSIMQDVIPNL-ADDQFTTFLRIYHA-- 308

  Fly   351 YDSVKLYAWAVDKMLREETRVLTDDVIFEVASNGTRVIDTIIKNRTYMSITGSKIKIDQYGDSEG 415
                 .||:.|..:...||:  ||:  :..|.:|..|      ...|.:.|     .|..|....
 Worm   309 -----CYAYCVGSVNGAETQ--TDN--YHTAMSGKAV------TTKYGTFT-----FDNSGSVLT 353

  Fly   416 NFSVLAYKPHKWN-------NSNNMPCN----YHMVPVAYFHQGEEHPEYKLINGSID--WPSGG 467
            |::|....|.:..       .|....|:    :.:.|                |.:.|  |....
 Worm   354 NYAVFTINPAEMTFESILTLKSVAKSCDTYNCFQLSP----------------NKTSDLLWTLKD 402

  Fly   468 EKPADEPMCGFANELCKKDDTHYTSTVAAVVLGVLLFCSGVITMSIYRKWKIELEIEGLLWKIDP 532
            ..|.|:  | .|...|.....|   .:||||:..::..:.||   |.::.:.:|.|..|.||:..
 Worm   403 MDPPDD--C-VAKSSCVNYIPH---IIAAVVIVTIIVIAIVI---IVKQRRHKLNIYKLTWKVPK 458

  Fly   533 NEIK--------GYSGNEIVSSPSKVSLMSAQSYGSRWTNQFVTSTGRLRGAVVRIKELKFPRKR 589
            ..:|        .....|:.:..|.....:|.:...|....:.. .|..|...|:.|::   ||.
 Worm   459 ESLKIIVNKNADAKMQRELENRASNTDNAAALTSRRRVFGSYAL-VGTQRAEYVQFKQI---RKI 519

  Fly   590 DISREIMKEMRLLRELRHDNINSFIGASVEP---TRILLVTDYCAKGSLYDIIENEDIKLDDLFI 651
            :.....:..:..|::|:|||:..|.|..|..   |..:|.| ...:|:|.:...:.|..:||.|.
 Worm   520 NFPETTLDYLYSLKQLQHDNLAKFYGIQVNDDIMTMTILHT-LVERGTLEEFCLDRDFGMDDTFK 583

  Fly   652 ASLIHDLIKGMIYIHNSQLVYHGNLKSSNCVVTSRWMLQVTDFGLHEL---RQCAENESIGEH-Q 712
            ::.:.|::||:.|:|.|.:.|||:|::|.|::...|:|::|.:|:...   :..|||..:.|. .
 Worm   584 SAFMRDILKGLQYLHKSSIGYHGHLQASTCLIDINWVLKLTLYGVSNFMSDQLDAENIKVPEQAA 648

  Fly   713 H---YRNQLWRAPELLRNH----------IHGSQKGDVYAFAIIMYEIFSRKGPFGQINFEPKEI 764
            |   |...:...||.:|.:          :.||.|||:|...:|.|.:..|:.|:..|:...:..
 Worm   649 HMITYPQYVCFPPEHIREYDDSGKQPPRVVRGSPKGDIYCVGMIFYMMVEREDPYHLIHSVERPN 713

  Fly   765 VDYVKKLPLKGE-----DPFRPEVESIIEAESCPDYVLACIRDCWAEDPEERPEFSVIRNRLKKM 824
            ...:|::..:..     |.:|.|           :.:|...::||..:|::||....:...:..:
 Worm   714 ATLIKQILNENHMPRITDDYRQE-----------NMLLEMCKECWDRNPDKRPTIKKLIESISTV 767

  Fly   825 RGGKTKNIMDQMMEMMEKYANNLEDIVTERTRLLCEEKMKTEDLLHRMLPQSVAEKLTMGQGVEP 889
            ......|::|||:.|.||||:.||.:|..||..|.:.:|:|..||:.|||.|:|:.|..|..:.|
 Worm   768 YPLSKGNLVDQMIRMSEKYADELEQMVAIRTADLADAQMQTMRLLNEMLPASIAKDLKNGLIMPP 832

  Fly   890 VSYDLVTIYFSDIVGFTAMSAESTPLQVVNFLNDLYTVFDRIIRGYDVYKVETIGDAYMVVSGLP 954
            .||:..|:.|..|..|.|:...|:|.||:.||||:|..||.:|:.:|.|||||.|:.|||.||:|
 Worm   833 RSYESATVMFVQICDFNALMKRSSPEQVIAFLNDIYDQFDTVIKRHDAYKVETTGETYMVASGVP 897

  Fly   955 IKNGDRHAGEIASMALELLHAVKQHRIAHRPNETLKLRIGMHTGPVVAGVVGLTMPRYCLFGDTV 1019
            .:|..||..|:|.::||:......:.:.|..|..|::|||.|.||:.|||:|:..||||||||||
 Worm   898 HENEGRHIFEVAEISLEIREISYIYVLQHDKNYKLRIRIGFHAGPIAAGVIGIRSPRYCLFGDTV 962

  Fly  1020 NTASRMESNGEALKIHISN-KCKLALDKLGGGYITEKRGLVNMKGKGDVVTWWLTGANENAIQKK 1083
            |.||||:||....:|..|. ..:|..|  ...|...|||:|::||||:|..:||   ||:..:  
 Worm   963 NFASRMQSNCPPNQIQTSEITARLLFD--SHEYKFVKRGIVHVKGKGEVNCYWL---NEHLHE-- 1020

  Fly  1084 LVDMMDMPPPLFSRPRKSPKLNPDSRQPSIQAMHFCGTGSRRQSTVP 1130
                 :..|||   |..:|..||                .||.|.||
 Worm  1021 -----ETEPPL---PPMTPVPNP----------------LRRGSIVP 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42637NP_524165.2 PBP1_SAP_GC-like 26..445 CDD:380593 77/429 (18%)
PK_GC-A_B 543..827 CDD:270944 72/308 (23%)
HNOBA <833..881 CDD:462234 23/47 (49%)
CYCc 860..1052 CDD:214485 85/192 (44%)
odr-1NP_001362115.1 Periplasmic_Binding_Protein_type1 63..378 CDD:471960 61/351 (17%)
PK_GC 495..768 CDD:270894 70/288 (24%)
CYCc 803..996 CDD:214485 86/194 (44%)

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