DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpml and Mcoln2

DIOPT Version :10

Sequence 1:NP_649145.1 Gene:Trpml / 40152 FlyBaseID:FBgn0262516 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_080932.2 Gene:Mcoln2 / 68279 MGIID:1915529 Length:566 Species:Mus musculus


Alignment Length:550 Identity:211/550 - (38%)
Similarity:324/550 - (58%) Gaps:39/550 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 GREEQPEFPG--------------SSAAS----YQEERMRRKLQFFFMNPIEKWQAKRKFPYKFV 121
            |.||..:.|.              |:.||    .:||.:|..|:|:||:|.||::|:|:.|:|..
Mouse     3 GDEETLDLPAWNRVPDLTWGPHHRSAMASLDSEVREECLREDLKFYFMSPCEKYRARRQIPWKLG 67

  Fly   122 VQIVKIFLVTMQLCLFAHSRYNHINYTGDNRFAFSHLFLRGWDSSREVESYPPAVGPFALYLKSE 186
            :||:||.:||.||..|..|....:.:..||..||.||||:|: |..:.:.|     ..::|.:..
Mouse    68 LQILKIVMVTTQLVRFGLSNQLVVAFKEDNTVAFKHLFLKGF-SGVDEDDY-----SCSIYTQEN 126

  Fly   187 FFDTVQYAVNGYANVSR-SIGPYDYPTPNNTMPPLKLCLQNYREGTIFGFNESYIFDPHIDEVCE 250
            .::::.:|:..|.::.. |:....|....:....||:|.|:|:.|.:|..||:...|..|:..|.
Mouse   127 TYESIFFAIKQYRHLKNISLATLGYGESEDNRTGLKVCKQHYKTGAMFSSNETLNIDSDIETDCI 191

  Fly   251 RLPPNVTTIGVENYLRQRDVEVNFASLVSAQLTFKIKTVNFKANGGPLSAPDCFRFDISITFNNR 315
            .|...|.|...|::.:.....::|..||...::|.:|.::.:|... ...|||:.|..:|||:|.
Mouse   192 HLDLQVLTTEPEDWAQTSFFRLDFYRLVQVDISFALKGIDLQAVHS-REIPDCYLFQNTITFDNT 255

  Fly   316 DHDGQMLLSLDAEATRLKCHGATDFISDANFDSMLRS-----VLNIFVLLTCALSFALCTRALWR 375
            .|.|::.:.|::||...:|....  ||    .|..||     |.::||::.|..|..||||::..
Mouse   256 AHSGKIKIYLNSEANIEECKNMN--IS----GSTQRSTHYLLVFDVFVIMICLASLILCTRSIVL 314

  Fly   376 AYLLRCTTVNFFRSQFGKELSFDGRLEFVNFWYIMIIFNDVLLIIGSALKEQIEGRYLVVDQWDT 440
            |..||...:|||..::.:.:....:.||||.||:::..:|::.||||.||.:|:.:.|.  .:|.
Mouse   315 ALRLRKRFLNFFLEKYKQRVCGADQWEFVNGWYVLVTISDLMTIIGSILKMEIKAKKLT--NYDV 377

  Fly   441 CSLFLGIGNLLVWFGVLRYLGFFKTYNVVILTLKKAAPKILRFLIAALLIYAGFVFCGWLILGPY 505
            ||:.||...|.||.||:||||:|:||||:|||::.:.||:|||...|.:||.|:.||||::||||
Mouse   378 CSILLGTSTLFVWVGVIRYLGYFQTYNVLILTMQASLPKVLRFCACAGMIYLGYTFCGWIVLGPY 442

  Fly   506 HMKFRSLATTSECLFALINGDDMFATFATLSSKATWLWWFCQIYLYSFISLYIYVVLSLFIAVIM 570
            |.||.:|...:||||:|:||||||||||.:..|:..:|.|.::||||||||:||:|||||||:|.
Mouse   443 HEKFENLNIVAECLFSLVNGDDMFATFAQIQQKSILVWLFSRLYLYSFISLFIYMVLSLFIALIT 507

  Fly   571 DAYDTIKAYYKDGFPTTDLKAFVGTRTAED 600
            |:|.|||.|.:.|||.|||:.|:....::|
Mouse   508 DSYHTIKKYQQHGFPETDLQKFLKESGSKD 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpmlNP_649145.1 ELD_TRPML 174..335 CDD:410965 40/161 (25%)
Ion_trans <403..578 CDD:459842 97/174 (56%)
Mcoln2NP_080932.2 Extracellular/lumenal pore loop. /evidence=ECO:0000250|UniProtKB:Q9GZU1 107..123 3/21 (14%)
ELD_TRPML 111..276 CDD:425394 42/170 (25%)
Ion_trans 292..518 CDD:459842 115/227 (51%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:F6RG56 461..464 2/2 (100%)

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