DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpml and mcoln1a

DIOPT Version :9

Sequence 1:NP_649145.1 Gene:Trpml / 40152 FlyBaseID:FBgn0262516 Length:652 Species:Drosophila melanogaster
Sequence 2:NP_001315094.1 Gene:mcoln1a / 406689 ZFINID:ZDB-GENE-040426-2704 Length:581 Species:Danio rerio


Alignment Length:564 Identity:213/564 - (37%)
Similarity:327/564 - (57%) Gaps:36/564 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 PEFPGSSAASYQEERMRRKLQFFFMNPIEKWQAKRKFPYKFVVQIVKIFLVTMQLCLFAHSRYNH 144
            |...|...|..:||.:||||::|||:|.||:|||.:.|:|.::||:||.:||.||.||..|....
Zfish    42 PVTDGWIGADPEEEELRRKLKYFFMSPCEKYQAKGRKPFKLILQILKIVIVTAQLVLFGLSNEMA 106

  Fly   145 INYTGDNRFAFSHLFLRGWDSSREVESYPPAVGPFALYLKSEFFDTVQYAVNGYANVS-RSIGPY 208
            :.:..:|..:|.||||:.:..|.:.         .|:|.:|:.:|.:.|||..|.::: .::|.|
Zfish   107 VMFKEENTASFKHLFLKDYADSDDA---------LAVYTQSDVYDHMFYAVEQYLSLADTTVGQY 162

  Fly   209 DY---PTPNNTMPPLKLCLQNYREGTIFGFNESYIFDPHIDEVCERLPPNVTTIGVENYLRQRDV 270
            .|   ...|.:  .|.||.|.|::|.|...|:::|.||.:...|..:.|..|..........|:.
Zfish   163 AYVYGVGVNGS--ALSLCQQYYKKGRIDPANDTFIIDPLVVTDCIGVNPLSTPTAAGTGRDYRNF 225

  Fly   271 EVNFASLVSAQLTFKIKTVNFKA---NGGPLSAPDCFRFDISITFNNRDHDGQMLLSLDAEATRL 332
            .:.|..|::..:.|::|.:|.:.   |    ..|||:.|.|:|..:|:.|.|::.:|||.:|:..
Zfish   226 TLKFHKLINVTIQFQLKAINLQTIIHN----EIPDCYTFLITILLDNKAHSGKVRISLDNKASIK 286

  Fly   333 KCHGATDFISDANFDSMLRSVLNIFVLLTCALSFALCTRALWRAYLLRCTTVNFFRSQFGKELSF 397
            :|.   |.....:.||..|.:.::.|.|.|..|..||.|::.|..:|:...|.:|::...:.:.:
Zfish   287 ECR---DPSVSGHPDSNARVLFDLAVALVCVFSLLLCGRSIIRGIILQNEFVKYFKTSLKRHVCW 348

  Fly   398 DGRLEFVNFWYIMIIFNDVLLIIGSALKEQIEGRYLVVDQWDTCSLFLGIGNLLVWFGVLRYLGF 462
            ..|:||:|.|||::|.:|:|.|.||.:|..||.:.|  ..:|.|.:.||...||||.||:|||.|
Zfish   349 GDRMEFINGWYILLIISDLLTITGSIIKIGIELKNL--SSYDECGILLGTSTLLVWVGVIRYLTF 411

  Fly   463 FKTYNVVILTLKKAAPKILRFLIAALLIYAGFVFCGWLILGPYHMKFRSLATTSECLFALINGDD 527
            |:.||::|:||:.|.|.::||.....:||.|:.||||::|||||:|||||::.|||||:||||||
Zfish   412 FQKYNILIVTLQAAFPNVIRFCCCVAVIYLGYCFCGWIVLGPYHVKFRSLSSVSECLFSLINGDD 476

  Fly   528 MFATFATLSSKATWLWWFCQIYLYSFISLYIYVVLSLFIAVIMDAYDTIKAYYKDGFPTTDLKAF 592
            ||.||:.:...:..:|.|.|:|||:||||:||:|||||||:|..||:|||...::....|||.||
Zfish   477 MFVTFSGMQESSMLVWVFSQVYLYTFISLFIYMVLSLFIALITGAYETIKHQTQEPIHITDLHAF 541

  Fly   593 VGTRTAEDISSGVFMTDLDDFDQTSFLDVVKSICCCGRCGRHQE 636
            :...| :...||.|..  .:....||      .|||.|...:::
Zfish   542 IAECT-DTPCSGKFRG--IETSPCSF------FCCCDRTTTYED 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpmlNP_649145.1 Ion_trans 403..578 CDD:278921 95/174 (55%)
mcoln1aNP_001315094.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592024
Domainoid 1 1.000 197 1.000 Domainoid score I3054
eggNOG 1 0.900 - - E1_KOG3733
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 383 1.000 Inparanoid score I2003
OMA 1 1.010 - - QHG49191
OrthoDB 1 1.010 - - D1379516at2759
OrthoFinder 1 1.000 - - FOG0001492
OrthoInspector 1 1.000 - - otm25448
orthoMCL 1 0.900 - - OOG6_102454
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3353
SonicParanoid 1 1.000 - - X949
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.700

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