DRSC/TRiP Functional Genomics Resources

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Protein Alignment serp and verm

DIOPT Version :10

Sequence 1:NP_730444.1 Gene:serp / 40150 FlyBaseID:FBgn0260653 Length:541 Species:Drosophila melanogaster
Sequence 2:XP_061510370.1 Gene:verm / 1280732 VectorBaseID:AGAMI1_002244 Length:540 Species:Anopheles gambiae


Alignment Length:547 Identity:317/547 - (57%)
Similarity:410/547 - (74%) Gaps:17/547 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAKLFVVFAVLALAAFNEASASDPLLRYKRQATTEETKKEESFEKELCKDKDAGEWFRLVAGEGD 65
            |||:..:|.:|.|.....|.     :|.|||  .|:...:....:|||||:...|:||| :.:||
Mosquito     1 MAKVIKLFGLLCLVVTIAAE-----VRVKRQ--DEDLDPDSINVEELCKDRPGDEYFRL-STDGD 57

  Fly    66 NCRDVIQCTSSG------LQAIRCPAGLYFDIEKQTCDWKESVKNCKSKNKERRVKPLLHTDEPL 124
             ||:|::|..:|      |..:|||.|||||:.:||||||.:||:|....|.|:|.|:|.||||:
Mosquito    58 -CREVVRCDDAGENGITRLAKVRCPTGLYFDVLRQTCDWKTNVKSCDLLGKPRKVLPILKTDEPI 121

  Fly   125 CQDGFLACGDGNCIERGLFCNGEKDCSDGSDENTCDIDNDPNRAPPCDPAVCVLPDCFCSEDGTS 189
            |.:|.|:||:|.||::.|||||:.||.|.||||.|.::.||||||.||...|||||||||.|||.
Mosquito   122 CPEGKLSCGNGECIDKELFCNGKPDCKDESDENACTVELDPNRAPDCDTTQCVLPDCFCSADGTR 186

  Fly   190 IPGDLPAKDVPMMITITFDDAINNNNIELYKEIFK-DRKNPNGCSIKATYFVSHKYTNYSAVQET 253
            |||::..:.||.||||||:.|:|.:||:||::||. .|:|||||.|:.|||||||||||||||:.
Mosquito   187 IPGNIEPQQVPQMITITFNGAVNVDNIDLYEDIFNGQRQNPNGCQIRGTYFVSHKYTNYSAVQDL 251

  Fly   254 ARKGHEIAVHSITHNDEERFWSNATVDDWAKEMAGMRIITEKFANITDNSVVGVRAPYLRVGGNN 318
            .||||||:|.|:||.|:..:|:..|.|||..||||.|:|.|:||||||.|::||||||||||||.
Mosquito   252 HRKGHEISVFSLTHKDDPTYWTQGTYDDWLAEMAGARLIVERFANITDGSIIGVRAPYLRVGGNK 316

  Fly   319 QFTMMEEQAFLYDSTITAPLSNPPLWPYTMYFRMPHRCHGNLQSCPTRSHAVWEMVMNELDRRED 383
            ||.||.:|.|:||::|||.|...|:||||:||||||:|:||..:||:|||.||||||||||||:|
Mosquito   317 QFEMMADQFFVYDASITASLGRVPIWPYTLYFRMPHKCNGNAHNCPSRSHPVWEMVMNELDRRDD 381

  Fly   384 PVNDEYLPGCAMVDSCSNILTGDQFYNFLNHNFDRHYDQNRAPLGLYFHAAWLKNNPEFLDAFLY 448
            |..||.||||.||||||||.:|:||...|.|||:|||:.|||||||:|||:|||:..|:.:..:.
Mosquito   382 PTFDESLPGCHMVDSCSNIQSGEQFGRLLRHNFNRHYNTNRAPLGLHFHASWLKSKKEYREELIK 446

  Fly   449 WIDEILANHNDVYFVTMTQVIQWMQNPRTISEVKNFEPWREKCVVEGKPACWVPNTCKLTSKEVP 513
            :|:|:| ..|||:||||.|||||||||..::.:::|:.|:|||.|:|:|.|.:||.|.||::|:|
Mosquito   447 FIEEML-GRNDVFFVTMLQVIQWMQNPTELNALRDFQEWKEKCDVKGQPYCSLPNACPLTTRELP 510

  Fly   514 GETINLQTCVRCPNNYPWVSDPTGDGF 540
            |||:.|.||:.|||||||:.|||||||
Mosquito   511 GETLRLFTCMECPNNYPWILDPTGDGF 537

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
serpNP_730444.1 CBM_14 48..105 CDD:426342 31/62 (50%)
LDLa 125..159 CDD:238060 20/33 (61%)
CE4_CDA_like_1 200..475 CDD:200596 179/275 (65%)
vermXP_061510370.1 None

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