DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta76C and Gnb5

DIOPT Version :9

Sequence 1:NP_523720.2 Gene:Gbeta76C / 40148 FlyBaseID:FBgn0004623 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_113958.1 Gene:Gnb5 / 83579 RGDID:620759 Length:353 Species:Rattus norvegicus


Alignment Length:347 Identity:125/347 - (36%)
Similarity:191/347 - (55%) Gaps:23/347 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KIDPETQKLYD-EINGMIQKFKDDQKSKADCTLADKCGDMGDVPKIRFSSKKILKGHINKVNSVH 66
            |::.|..||:| |::                .:|::...:|   :....:::.||||.|||..:.
  Rat    25 KLEEERAKLHDVELH----------------QVAERVEALG---QFVMKTRRTLKGHGNKVLCMD 70

  Fly    67 FAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCTVYDVN 131
            :..|.|..|:.|.|||:|:||::|.||...:.:...|||..|::|||..:||||:||:|:||.:.
  Rat    71 WCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 135

  Fly   132 NRDASGVAKMVKELMGYEGFLSSCRFLD-DGHLITGSGDMKICHWDLEKGVKTMDFNGHAGDIAG 195
            ......:|...|.:..:..:||:|.|.: |..::|.|||.....||:|.|.....|:||..|:..
  Rat   136 FDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLC 200

  Fly   196 LSLSPDM--KTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARM 258
            |.|:|..  .|:::|..||.|.:||:|.....|.|..|:.||:||.|:|||..|||.|:|.|.|:
  Rat   201 LDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRL 265

  Fly   259 YDLRADQQIAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITC 323
            ||||||:::|.|.......|.:|...|.|||.|..|..:..::.||.:|......|.|||||::.
  Rat   266 YDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVST 330

  Fly   324 ISLCPNGMCLASTSWDQQVRLW 345
            :.:.|:|....|.|||..:|:|
  Rat   331 LRVSPDGTAFCSGSWDHTLRVW 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta76CNP_523720.2 WD40 <45..345 CDD:225201 116/302 (38%)
WD40 51..345 CDD:238121 116/296 (39%)
WD40 repeat 64..99 CDD:293791 13/34 (38%)
WD40 repeat 105..147 CDD:293791 16/41 (39%)
WD40 repeat 152..187 CDD:293791 13/35 (37%)
WD40 repeat 194..229 CDD:293791 12/36 (33%)
WD40 repeat 235..271 CDD:293791 21/35 (60%)
WD40 repeat 279..315 CDD:293791 10/35 (29%)
WD40 repeat 321..345 CDD:293791 7/23 (30%)
Gnb5NP_113958.1 WD40 56..353 CDD:238121 117/297 (39%)
WD 1 61..100 18/38 (47%)
WD40 repeat 66..103 CDD:293791 14/36 (39%)
WD 2 103..142 16/38 (42%)
WD40 repeat 109..151 CDD:293791 16/41 (39%)
WD 3 151..192 13/40 (33%)
WD40 repeat 156..192 CDD:293791 13/35 (37%)
WD 4 194..236 14/41 (34%)
WD40 repeat 199..236 CDD:293791 12/36 (33%)
WD 5 237..276 22/38 (58%)
WD40 repeat 242..278 CDD:293791 21/35 (60%)
WD 6 278..320 11/41 (27%)
WD40 repeat 286..322 CDD:293791 10/35 (29%)
WD 7 323..352 12/28 (43%)
WD40 repeat 328..352 CDD:293791 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X182
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.820

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