DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta76C and Gnb2

DIOPT Version :9

Sequence 1:NP_523720.2 Gene:Gbeta76C / 40148 FlyBaseID:FBgn0004623 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_112299.1 Gene:Gnb2 / 81667 RGDID:69319 Length:340 Species:Rattus norvegicus


Alignment Length:339 Identity:148/339 - (43%)
Similarity:226/339 - (66%) Gaps:2/339 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ETQKLYDEINGMIQKFKDDQKSKADCTLADKCGDMGDVPKIRFSSKKILKGHINKVNSVHFAGDS 71
            |.::|..|...:..:.:|.:|:..|.||......:..|.:|:..:::.|:||:.|:.::|:..||
  Rat     3 ELEQLRQEAEQLRNQIRDARKACGDSTLTQITAGLDPVGRIQMRTRRTLRGHLAKIYAMHWGTDS 67

  Fly    72 RHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCTVYDVNNRDAS 136
            |..|:.|.||||||||::|.|||..|||||:||||.|::||||||||||:||.|::|.:..|:  
  Rat    68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNFVACGGLDNICSIYSLKTRE-- 130

  Fly   137 GVAKMVKELMGYEGFLSSCRFLDDGHLITGSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPD 201
            |..::.:||.|:.|:||.||||||..:||.|||.....||:|.|.:|:.|.||:||:..|||:||
  Rat   131 GNVRVSRELPGHTGYLSCCRFLDDNQIITSSGDTTCALWDIETGQQTVGFAGHSGDVMSLSLAPD 195

  Fly   202 MKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYDLRADQQ 266
            .:|:::|:.|.:.||||||:...:|.|.||:.|:::|.:.|:|:.|.:.|:|.|.|::||||||:
  Rat   196 GRTFVSGACDASIKLWDVRDSMCRQTFIGHESDINAVAFFPNGYAFTTGSDDATCRLFDLRADQE 260

  Fly   267 IAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCISLCPNGM 331
            :..|.......|.||.|.|.|||.|:.|..:.|.:.||.||....|.|:||:||::|:.:..:||
  Rat   261 LLMYSHDNIICGITSVAFSRSGRLLLAGYDDFNCNIWDAMKGDRAGVLAGHDNRVSCLGVTDDGM 325

  Fly   332 CLASTSWDQQVRLW 345
            .:|:.|||..:::|
  Rat   326 AVATGSWDSFLKIW 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta76CNP_523720.2 WD40 <45..345 CDD:225201 138/299 (46%)
WD40 51..345 CDD:238121 137/293 (47%)
WD40 repeat 64..99 CDD:293791 19/34 (56%)
WD40 repeat 105..147 CDD:293791 21/41 (51%)
WD40 repeat 152..187 CDD:293791 18/34 (53%)
WD40 repeat 194..229 CDD:293791 15/34 (44%)
WD40 repeat 235..271 CDD:293791 14/35 (40%)
WD40 repeat 279..315 CDD:293791 15/35 (43%)
WD40 repeat 321..345 CDD:293791 7/23 (30%)
Gnb2NP_112299.1 WD40 48..340 CDD:238121 138/294 (47%)
WD 1 53..83 15/29 (52%)
WD40 repeat 58..95 CDD:293791 19/36 (53%)
WD 2 95..125 21/29 (72%)
WD40 repeat 101..141 CDD:293791 21/41 (51%)
WD 3 141..170 15/28 (54%)
WD40 repeat 146..181 CDD:293791 18/34 (53%)
WD 4 182..212 14/29 (48%)
WD40 repeat 188..223 CDD:293791 15/34 (44%)
WD 5 224..254 11/29 (38%)
WD40 repeat 229..265 CDD:293791 14/35 (40%)
WD 6 268..298 11/29 (38%)
WD40 repeat 273..309 CDD:293791 15/35 (43%)
WD 7 310..340 12/30 (40%)
WD40 repeat 315..339 CDD:293791 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X182
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

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