DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta76C and gnb3a

DIOPT Version :9

Sequence 1:NP_523720.2 Gene:Gbeta76C / 40148 FlyBaseID:FBgn0004623 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001002437.1 Gene:gnb3a / 436710 ZFINID:ZDB-GENE-040718-134 Length:340 Species:Danio rerio


Alignment Length:345 Identity:143/345 - (41%)
Similarity:222/345 - (64%) Gaps:9/345 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPKIDPETQKLYDEINGMIQKFKDDQKSKADCTLADKCGDMGDVPKIRFSSKKILKGHINKVNSV 65
            |.::..|.:||.|:|...       :|:..|.||.|.......|.:::..::|.|:||:.|:.::
Zfish     4 MEQLRKEAEKLKDDITAA-------RKTVQDLTLQDHVAGTAVVGRVQLKTRKTLRGHLAKIYAM 61

  Fly    66 HFAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCTVYDV 130
            |:..||:.||:.|.|||||:||::|.|||..|||:|:||||.:::||||.|||||:||.|::|::
Zfish    62 HWGTDSKLCVSASQDGKLIVWDSYTTNKVHAIPLKSSWVMTCSYAPSGNMVACGGLDNMCSIYNL 126

  Fly   131 NNRDASGVAKMVKELMGYEGFLSSCRFLDDGHLITGSGDMKICHWDLEKGVKTMDFNGHAGDIAG 195
            ..:|  |..|:::||..:.|:||.||||.|..:||.|||.....||:|.|.:...|.||.||...
Zfish   127 KAKD--GNVKVMRELAAHTGYLSCCRFLSDSEIITSSGDCTCVLWDIETGSQKTVFAGHLGDCMS 189

  Fly   196 LSLSPDMKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYD 260
            |::|||..|:|:|:.|.||||||:||...:|.|.||:.|::::.:.|:|....:.|:|.:.::||
Zfish   190 LAVSPDFNTFISGACDFTAKLWDIREGQCRQTFGGHESDINAIGFFPNGNAVITGSDDASCKLYD 254

  Fly   261 LRADQQIAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCIS 325
            ||:||::..|:......|.||.|.|.|||.::.|..:.|.:.||::|....|.||||:||::||.
Zfish   255 LRSDQELITYQDSSIMCGVTSIAPSLSGRLILAGYDDFNCNIWDSLKSERVGVLSGHDNRVSCIG 319

  Fly   326 LCPNGMCLASTSWDQQVRLW 345
            :.|:||...:.|||..:::|
Zfish   320 VTPDGMACCTGSWDSFLKIW 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta76CNP_523720.2 WD40 <45..345 CDD:225201 130/299 (43%)
WD40 51..345 CDD:238121 130/293 (44%)
WD40 repeat 64..99 CDD:293791 18/34 (53%)
WD40 repeat 105..147 CDD:293791 20/41 (49%)
WD40 repeat 152..187 CDD:293791 16/34 (47%)
WD40 repeat 194..229 CDD:293791 17/34 (50%)
WD40 repeat 235..271 CDD:293791 10/35 (29%)
WD40 repeat 279..315 CDD:293791 13/35 (37%)
WD40 repeat 321..345 CDD:293791 8/23 (35%)
gnb3aNP_001002437.1 WD40 48..340 CDD:238121 131/294 (45%)
WD40 repeat 58..95 CDD:293791 18/36 (50%)
WD40 repeat 101..141 CDD:293791 20/41 (49%)
WD40 repeat 146..181 CDD:293791 16/34 (47%)
WD40 repeat 188..223 CDD:293791 17/34 (50%)
WD40 repeat 229..265 CDD:293791 10/35 (29%)
WD40 repeat 273..309 CDD:293791 13/35 (37%)
WD40 repeat 315..339 CDD:293791 8/23 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.880

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