DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta76C and gnb1b

DIOPT Version :10

Sequence 1:NP_523720.2 Gene:Gbeta76C / 40148 FlyBaseID:FBgn0004623 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_998646.1 Gene:gnb1b / 406796 ZFINID:ZDB-GENE-040426-2855 Length:340 Species:Danio rerio


Alignment Length:339 Identity:148/339 - (43%)
Similarity:228/339 - (67%) Gaps:2/339 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ETQKLYDEINGMIQKFKDDQKSKADCTLADKCGDMGDVPKIRFSSKKILKGHINKVNSVHFAGDS 71
            |..:|..|...:..:.:|.:|:.||.||:....::..|.:|:..:::.|:||:.|:.::|:..||
Zfish     3 ELDQLRQEAEQLKNQIRDARKACADATLSQITANIDPVGRIQMRTRRTLRGHLAKIYAMHWGTDS 67

  Fly    72 RHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCTVYDVNNRDAS 136
            |..|:.|.||||||||::|.|||..|||||:||||.|::||||:|||||:||.|::|.:..|:  
Zfish    68 RLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKTRE-- 130

  Fly   137 GVAKMVKELMGYEGFLSSCRFLDDGHLITGSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPD 201
            |..::.:||.|:.|:||.||||||..::|.|||.....||:|.|.:|..|.||.||:..|||:||
Zfish   131 GNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFAGHTGDVMSLSLAPD 195

  Fly   202 MKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYDLRADQQ 266
            .:.:::|:.|.:|||||:||...:|.|.||:.|::::|:.|:|..||:.|:|.|.|::||||||:
Zfish   196 TRLFVSGACDASAKLWDIREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQE 260

  Fly   267 IAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCISLCPNGM 331
            :..|.......|.||.|.|.|||.|:.|..:.|.:.|||:|....|.|:||:||::|:.:..:||
Zfish   261 LMVYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTLKADRAGVLAGHDNRVSCLGVTDDGM 325

  Fly   332 CLASTSWDQQVRLW 345
            .:|:.|||..:::|
Zfish   326 AVATGSWDSFLKIW 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta76CNP_523720.2 WD40 51..345 CDD:238121 136/293 (46%)
WD40 repeat 64..99 CDD:293791 19/34 (56%)
WD40 repeat 105..147 CDD:293791 20/41 (49%)
WD40 repeat 152..187 CDD:293791 17/34 (50%)
WD40 repeat 194..229 CDD:293791 15/34 (44%)
WD40 repeat 235..271 CDD:293791 15/35 (43%)
WD40 repeat 279..315 CDD:293791 15/35 (43%)
WD40 repeat 321..345 CDD:293791 7/23 (30%)
gnb1bNP_998646.1 WD40 48..340 CDD:238121 137/294 (47%)
WD40 repeat 58..95 CDD:293791 19/36 (53%)
WD40 repeat 101..141 CDD:293791 20/41 (49%)
WD40 repeat 146..181 CDD:293791 17/34 (50%)
WD40 repeat 188..223 CDD:293791 15/34 (44%)
WD40 repeat 229..265 CDD:293791 15/35 (43%)
WD40 repeat 273..309 CDD:293791 15/35 (43%)
WD40 repeat 315..339 CDD:293791 7/23 (30%)

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