DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta76C and gnb3b

DIOPT Version :9

Sequence 1:NP_523720.2 Gene:Gbeta76C / 40148 FlyBaseID:FBgn0004623 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_998367.1 Gene:gnb3b / 406483 ZFINID:ZDB-GENE-040426-2280 Length:338 Species:Danio rerio


Alignment Length:339 Identity:140/339 - (41%)
Similarity:213/339 - (62%) Gaps:4/339 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ETQKLYDEINGMIQKFKDDQKSKADCTLADKCGDMGDVPKIRFSSKKILKGHINKVNSVHFAGDS 71
            |.:::..|..|:..:.:..:|:..|..:|.....:...|:::..::|.||||:.|:.::|:..|:
Zfish     3 EMEQMKKEAEGLKTQIEAARKAAHDTDMAAAAAGVAPAPRVQLKTRKTLKGHLAKIYAMHWCTDN 67

  Fly    72 RHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCTVYDVNNRDAS 136
            |..|:.|.||||:|||..:.|||..:||:|:||||.:::||||.||.||:||.||||::.    :
Zfish    68 RLMVSASQDGKLLIWDAHSGNKVNAVPLKSSWVMTCSYAPSGNLVASGGLDNMCTVYNLK----T 128

  Fly   137 GVAKMVKELMGYEGFLSSCRFLDDGHLITGSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPD 201
            .|.|.||||..:.|:||.|||:.|..::|.|||.....||||.|.:...|..|.||...||||||
Zfish   129 PVIKTVKELDAHTGYLSCCRFISDTEIVTSSGDTTCALWDLETGKQKTVFLNHIGDCMCLSLSPD 193

  Fly   202 MKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYDLRADQQ 266
            ...:|:|:.|..|||||:|:...||.|.||..|::::.:.||...|.:.|:|.|.:|||:||||:
Zfish   194 NNMFISGACDSLAKLWDIRDGQCKQTFQGHTSDINAISFLPSATAFITGSDDCTCKMYDIRADQE 258

  Fly   267 IAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCISLCPNGM 331
            :..|:....|:|.||.|||.|||.:..|..:.|.:.||::|....|.||||:||::|..:..:||
Zfish   259 VICYQDSALNSGVTSVALSVSGRLIFAGYDDFNCNIWDSLKGEKVGVLSGHDNRVSCTGVPGDGM 323

  Fly   332 CLASTSWDQQVRLW 345
            |:.:.|||..:::|
Zfish   324 CVCTGSWDSFLKIW 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta76CNP_523720.2 WD40 <45..345 CDD:225201 133/299 (44%)
WD40 51..345 CDD:238121 132/293 (45%)
WD40 repeat 64..99 CDD:293791 15/34 (44%)
WD40 repeat 105..147 CDD:293791 22/41 (54%)
WD40 repeat 152..187 CDD:293791 15/34 (44%)
WD40 repeat 194..229 CDD:293791 17/34 (50%)
WD40 repeat 235..271 CDD:293791 13/35 (37%)
WD40 repeat 279..315 CDD:293791 14/35 (40%)
WD40 repeat 321..345 CDD:293791 7/23 (30%)
gnb3bNP_998367.1 WD40 <46..338 CDD:225201 133/296 (45%)
WD40 48..338 CDD:238121 133/294 (45%)
WD40 repeat 58..95 CDD:293791 15/36 (42%)
WD40 repeat 101..139 CDD:293791 22/41 (54%)
WD40 repeat 144..179 CDD:293791 15/34 (44%)
WD40 repeat 186..221 CDD:293791 17/34 (50%)
WD40 repeat 227..263 CDD:293791 13/35 (37%)
WD40 repeat 271..307 CDD:293791 14/35 (40%)
WD40 repeat 313..337 CDD:293791 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.880

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