DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta76C and Gbeta13F

DIOPT Version :9

Sequence 1:NP_523720.2 Gene:Gbeta76C / 40148 FlyBaseID:FBgn0004623 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001303567.1 Gene:Gbeta13F / 32544 FlyBaseID:FBgn0001105 Length:340 Species:Drosophila melanogaster


Alignment Length:339 Identity:148/339 - (43%)
Similarity:226/339 - (66%) Gaps:2/339 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ETQKLYDEINGMIQKFKDDQKSKADCTLADKCGDMGDVPKIRFSSKKILKGHINKVNSVHFAGDS 71
            |...|..|...:....:|.:|:..|.:|......:..:.:|:..:::.|:||:.|:.::|:..||
  Fly     3 ELDSLRQEAESLKNAIRDARKAACDTSLLQAATSLEPIGRIQMRTRRTLRGHLAKIYAMHWGNDS 67

  Fly    72 RHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCTVYDVNNRDAS 136
            |:.|:.|.|||||:||:.|.|||..|||||:||||.|::|||::|||||:||.|::|::..|:  
  Fly    68 RNLVSASQDGKLIVWDSHTTNKVHAIPLRSSWVMTCAYAPSGSYVACGGLDNMCSIYNLKTRE-- 130

  Fly   137 GVAKMVKELMGYEGFLSSCRFLDDGHLITGSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPD 201
            |..::.:||.|:.|:||.||||||..::|.||||....||:|.|::...|.||.||:..|||:|.
  Fly   131 GNVRVSRELPGHGGYLSCCRFLDDNQIVTSSGDMSCGLWDIETGLQVTSFLGHTGDVMALSLAPQ 195

  Fly   202 MKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYDLRADQQ 266
            .||:::|:.|.:|||||:||...||.|.||:.|:::|.:.|:|..||:.|:|.|.|::|:||||:
  Fly   196 CKTFVSGACDASAKLWDIREGVCKQTFPGHESDINAVTFFPNGQAFATGSDDATCRLFDIRADQE 260

  Fly   267 IAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCISLCPNGM 331
            :|.|.......|.||.|.|.|||.|:.|..:.|.:.|||||...:|.|:||:||::|:.:..|||
  Fly   261 LAMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDTMKAERSGILAGHDNRVSCLGVTENGM 325

  Fly   332 CLASTSWDQQVRLW 345
            .:|:.|||..:|:|
  Fly   326 AVATGSWDSFLRVW 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta76CNP_523720.2 WD40 <45..345 CDD:225201 140/299 (47%)
WD40 51..345 CDD:238121 139/293 (47%)
WD40 repeat 64..99 CDD:293791 18/34 (53%)
WD40 repeat 105..147 CDD:293791 19/41 (46%)
WD40 repeat 152..187 CDD:293791 17/34 (50%)
WD40 repeat 194..229 CDD:293791 17/34 (50%)
WD40 repeat 235..271 CDD:293791 15/35 (43%)
WD40 repeat 279..315 CDD:293791 16/35 (46%)
WD40 repeat 321..345 CDD:293791 9/23 (39%)
Gbeta13FNP_001303567.1 WD40 48..340 CDD:238121 140/294 (48%)
WD40 repeat 58..95 CDD:293791 18/36 (50%)
WD40 repeat 101..141 CDD:293791 19/41 (46%)
WD40 repeat 146..181 CDD:293791 17/34 (50%)
WD40 repeat 188..223 CDD:293791 17/34 (50%)
WD40 repeat 229..265 CDD:293791 15/35 (43%)
WD40 repeat 273..309 CDD:293791 16/35 (46%)
WD40 repeat 315..339 CDD:293791 9/23 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468719
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 304 1.000 Inparanoid score I767
Isobase 1 0.950 - 0 Normalized mean entropy S419
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - otm46827
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
109.850

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