DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta76C and git5

DIOPT Version :9

Sequence 1:NP_523720.2 Gene:Gbeta76C / 40148 FlyBaseID:FBgn0004623 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_595613.1 Gene:git5 / 2539974 PomBaseID:SPBC32H8.07 Length:305 Species:Schizosaccharomyces pombe


Alignment Length:307 Identity:113/307 - (36%)
Similarity:171/307 - (55%) Gaps:8/307 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 DMGDVPKIRFSSKKILKGHINKVNSVHFAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWV 104
            |.|....:.....::||..:.|:..:..:.|.::.::.|.:..|::||..|:|||......|.|:
pombe     2 DSGSRVNVNIQGTRVLKNKLGKIPDIDISTDGKYLLSASTNDVLLVWDLHTSNKVAFFEAPSVWI 66

  Fly   105 MTVAFSPSGNFVACGGMDNQCTVYDVNNRDASGVAKMVKELMGYEGFLSSCRFLDDGHLITGSGD 169
            ||.|||||...:|.||::|.|.|||.:..||..|     ||:|:.||:|.|:::|||||:|||||
pombe    67 MTCAFSPSTKSIAAGGLNNFCVVYDTSVPDADPV-----ELVGHAGFVSCCKYVDDGHLLTGSGD 126

  Fly   170 MKICHWDLEKGVKTMDFNGHAGDIAGLSLSP-DMKTYITGSVDKTAKLWDVREEGHKQMFFGHDM 233
            .....||:|:........||..||..|...| :...::||..||.|||||:|.......|.|:..
pombe   127 KTCMFWDIEQAKAISVLKGHEMDIVSLDFLPSNPNLFVTGGCDKLAKLWDLRAAYCCATFPGNTS 191

  Fly   234 DVSSVCYHPSGFGFASCSEDQTARMYDLRADQQIAQYEPPQKNTGFTSCALSTSGRYLMCGGIEG 298
            |::|:.:.||...|.:.:||..||.:|:||..:|.||..| .::...|...|.||:.|.... :.
pombe   192 DINSISFFPSNADFVTGAEDGIARCFDIRASAEIFQYSSP-SSSPINSVLFSKSGKLLFIAK-DK 254

  Fly   299 NVHSWDTMKQRHTGTLSGHENRITCISLCPNGMCLASTSWDQQVRLW 345
            ....||::..:...:|:||||||:.::|..:|..||:.|||:.||||
pombe   255 TCEVWDSISSKTITSLTGHENRISSLALTSDGTMLATGSWDECVRLW 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta76CNP_523720.2 WD40 <45..345 CDD:225201 109/300 (36%)
WD40 51..345 CDD:238121 109/294 (37%)
WD40 repeat 64..99 CDD:293791 9/34 (26%)
WD40 repeat 105..147 CDD:293791 20/41 (49%)
WD40 repeat 152..187 CDD:293791 15/34 (44%)
WD40 repeat 194..229 CDD:293791 12/35 (34%)
WD40 repeat 235..271 CDD:293791 13/35 (37%)
WD40 repeat 279..315 CDD:293791 7/35 (20%)
WD40 repeat 321..345 CDD:293791 10/23 (43%)
git5NP_595613.1 WD40 1..>302 CDD:225201 113/307 (37%)
WD40 14..302 CDD:238121 111/295 (38%)
WD40 repeat 26..61 CDD:293791 9/34 (26%)
WD40 repeat 66..104 CDD:293791 20/42 (48%)
WD40 repeat 110..145 CDD:293791 15/34 (44%)
WD40 repeat 150..187 CDD:293791 13/36 (36%)
WD40 repeat 194..229 CDD:293791 13/34 (38%)
WD40 repeat 236..271 CDD:293791 7/35 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 257 1.000 Inparanoid score I758
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 1 1.000 - - otm47282
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
TreeFam 1 0.960 - -
87.920

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