DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta76C and Gnb5

DIOPT Version :9

Sequence 1:NP_523720.2 Gene:Gbeta76C / 40148 FlyBaseID:FBgn0004623 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_034443.1 Gene:Gnb5 / 14697 MGIID:101848 Length:395 Species:Mus musculus


Alignment Length:347 Identity:125/347 - (36%)
Similarity:191/347 - (55%) Gaps:23/347 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KIDPETQKLYD-EINGMIQKFKDDQKSKADCTLADKCGDMGDVPKIRFSSKKILKGHINKVNSVH 66
            |::.|..||:| |::                .:|::...:|   :....:::.||||.|||..:.
Mouse    67 KLEEERAKLHDVELH----------------QVAERVEALG---QFVMKTRRTLKGHGNKVLCMD 112

  Fly    67 FAGDSRHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCTVYDVN 131
            :..|.|..|:.|.|||:|:||::|.||...:.:...|||..|::|||..:||||:||:|:||.:.
Mouse   113 WCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLT 177

  Fly   132 NRDASGVAKMVKELMGYEGFLSSCRFLD-DGHLITGSGDMKICHWDLEKGVKTMDFNGHAGDIAG 195
            ......:|...|.:..:..:||:|.|.: |..::|.|||.....||:|.|.....|:||..|:..
Mouse   178 FDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLC 242

  Fly   196 LSLSPDM--KTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARM 258
            |.|:|..  .|:::|..||.|.:||:|.....|.|..|:.||:||.|:|||..|||.|:|.|.|:
Mouse   243 LDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRL 307

  Fly   259 YDLRADQQIAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITC 323
            ||||||:::|.|.......|.:|...|.|||.|..|..:..::.||.:|......|.|||||::.
Mouse   308 YDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVST 372

  Fly   324 ISLCPNGMCLASTSWDQQVRLW 345
            :.:.|:|....|.|||..:|:|
Mouse   373 LRVSPDGTAFCSGSWDHTLRVW 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta76CNP_523720.2 WD40 <45..345 CDD:225201 116/302 (38%)
WD40 51..345 CDD:238121 116/296 (39%)
WD40 repeat 64..99 CDD:293791 13/34 (38%)
WD40 repeat 105..147 CDD:293791 16/41 (39%)
WD40 repeat 152..187 CDD:293791 13/35 (37%)
WD40 repeat 194..229 CDD:293791 12/36 (33%)
WD40 repeat 235..271 CDD:293791 21/35 (60%)
WD40 repeat 279..315 CDD:293791 10/35 (29%)
WD40 repeat 321..345 CDD:293791 7/23 (30%)
Gnb5NP_034443.1 WD40 98..395 CDD:238121 117/297 (39%)
WD 1 103..142 18/38 (47%)
WD40 repeat 108..145 CDD:293791 14/36 (39%)
WD 2 145..184 16/38 (42%)
WD40 repeat 151..193 CDD:293791 16/41 (39%)
WD 3 193..234 13/40 (33%)
WD40 repeat 198..234 CDD:293791 13/35 (37%)
WD 4 236..278 14/41 (34%)
WD40 repeat 241..278 CDD:293791 12/36 (33%)
WD 5 279..318 22/38 (58%)
WD40 repeat 284..320 CDD:293791 21/35 (60%)
WD 6 320..362 11/41 (27%)
WD40 repeat 328..364 CDD:293791 10/35 (29%)
WD 7 365..394 12/28 (43%)
WD40 repeat 370..394 CDD:293791 7/23 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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