DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gbeta76C and gnb4a

DIOPT Version :9

Sequence 1:NP_523720.2 Gene:Gbeta76C / 40148 FlyBaseID:FBgn0004623 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_021322372.1 Gene:gnb4a / 100332205 ZFINID:ZDB-GENE-091102-1 Length:340 Species:Danio rerio


Alignment Length:339 Identity:145/339 - (42%)
Similarity:227/339 - (66%) Gaps:2/339 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ETQKLYDEINGMIQKFKDDQKSKADCTLADKCGDMGDVPKIRFSSKKILKGHINKVNSVHFAGDS 71
            |.::|..|...:..:.:|.:|:.:|.:|:.....:..|.:|:..:::.|:||:.|:.::|:..||
Zfish     3 ELEQLRQEAEQLRNQIRDARKACSDSSLSQITAGLDSVGRIQMRTRRTLRGHLAKIYAMHWGTDS 67

  Fly    72 RHCVTGSLDGKLIIWDTWTANKVQIIPLRSAWVMTVAFSPSGNFVACGGMDNQCTVYDVNNRDAS 136
            |..|:.|.|||||:||::|.||:..|||||:||||.|::||||:|||||:||.|::|.:..|:  
Zfish    68 RLLVSASQDGKLIVWDSYTTNKIHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYSLKTRE-- 130

  Fly   137 GVAKMVKELMGYEGFLSSCRFLDDGHLITGSGDMKICHWDLEKGVKTMDFNGHAGDIAGLSLSPD 201
            |..::.:||.|:.|:||.||||||..::|.|||.....||:|.|.:|..|.||:||:..||||||
Zfish   131 GNVRVTRELPGHTGYLSCCRFLDDSQIVTSSGDTTCALWDIETGQQTTTFTGHSGDVMSLSLSPD 195

  Fly   202 MKTYITGSVDKTAKLWDVREEGHKQMFFGHDMDVSSVCYHPSGFGFASCSEDQTARMYDLRADQQ 266
            .||:::|:.|.::||||:|:...:|.|.||..|:::||:.|:|..|.:.|:|.|.|::||||||:
Zfish   196 SKTFVSGACDASSKLWDIRDGMCRQSFTGHVSDINAVCFFPNGNAFTTGSDDATCRLFDLRADQE 260

  Fly   267 IAQYEPPQKNTGFTSCALSTSGRYLMCGGIEGNVHSWDTMKQRHTGTLSGHENRITCISLCPNGM 331
            :..|.......|.||.|.|.|||.|:.|..:.|.:.||.:|....|.|:||:||::|:.:..:||
Zfish   261 LMMYSHDNIICGITSVAFSKSGRLLLAGYDDFNCNVWDMLKGERAGVLAGHDNRVSCLGVTSDGM 325

  Fly   332 CLASTSWDQQVRLW 345
            .:|:.|||..:|:|
Zfish   326 AVATGSWDSFLRIW 339

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Gbeta76CNP_523720.2 WD40 <45..345 CDD:225201 136/299 (45%)
WD40 51..345 CDD:238121 135/293 (46%)
WD40 repeat 64..99 CDD:293791 17/34 (50%)
WD40 repeat 105..147 CDD:293791 20/41 (49%)
WD40 repeat 152..187 CDD:293791 17/34 (50%)
WD40 repeat 194..229 CDD:293791 16/34 (47%)
WD40 repeat 235..271 CDD:293791 15/35 (43%)
WD40 repeat 279..315 CDD:293791 14/35 (40%)
WD40 repeat 321..345 CDD:293791 8/23 (35%)
gnb4aXP_021322372.1 WD40 48..340 CDD:238121 136/294 (46%)
WD40 repeat 58..95 CDD:293791 17/36 (47%)
WD40 repeat 101..141 CDD:293791 20/41 (49%)
WD40 repeat 146..181 CDD:293791 17/34 (50%)
WD40 repeat 188..223 CDD:293791 16/34 (47%)
WD40 repeat 229..265 CDD:293791 15/35 (43%)
WD40 repeat 273..309 CDD:293791 14/35 (40%)
WD40 repeat 315..339 CDD:293791 8/23 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0286
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D313727at33208
OrthoFinder 1 1.000 - - FOG0000271
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19850
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X182
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
65.920

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