DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8765 and Coop

DIOPT Version :9

Sequence 1:NP_649141.1 Gene:CG8765 / 40147 FlyBaseID:FBgn0036900 Length:690 Species:Drosophila melanogaster
Sequence 2:NP_001260776.1 Gene:Coop / 35677 FlyBaseID:FBgn0263240 Length:358 Species:Drosophila melanogaster


Alignment Length:439 Identity:88/439 - (20%)
Similarity:160/439 - (36%) Gaps:121/439 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 AANQSSSAATITSNVSTTSA-AHNQSTNAEEEDDDPIHTFLNMESYFEKELITLIQQEDMIYNYG 333
            |.|.|||||::.|..:..|| |....||..:.   ||.|.        |.||..:.:..|::...
  Fly     4 AYNASSSAASVGSASAAASATASFAFTNTAKL---PIETV--------KRLIAAVSRRPMLWLRN 57

  Fly   334 NENYRNAKLKMEVWEEIARKLKKSVKQCRLKWKALRDQYAREHKRLRTLMHIDATSRWKHYNSLS 398
            |.|.:.......||.|:.:.:......||:||..|||.:.:.:  :|..:..:..|.|:.||.:.
  Fly    58 NANGQKRSDITPVWFEVGQDVNLPADICRIKWGHLRDNFRKVY--IRNNLSNETPSSWRFYNDMR 120

  Fly   399 FLQKYIQQKTLESDSQLSMLLPKNDPVRELEDHMTQSH---------SPP---TQQITLESSSSN 451
            |::..:.:..:......|   .|:.|     .|.|:::         |.|   |:.|...|.|.:
  Fly   121 FMEPAVHENIMRQTRSSS---KKHPP-----GHWTENNNVLGPDKYDSMPIVATEPICELSHSYD 177

  Fly   452 SQLNLPTLPHLTGPHKAEQQQQQQQQEEQHQQQQQHQQQQQQQQASELCVATYDDMDIENYINGD 516
            |:|:.|:...::...:....|..:.:..:.:..|:.:                            
  Fly   178 SELHQPSFSDISSFFEDRDCQPPENKRFKSEPSQREE---------------------------- 214

  Fly   517 VHHNDDDVEDDEDEEMETTTAAEQPPQQQD---QHVMTYD--HEDGPVYMAVPSVGSAMSKQEQL 576
                |::.:||.||:..:....|:...:.|   ..|.|.:  .:|..:..||     ..:|....
  Fly   215 ----DEEDDDDFDEDAASENLEEERGNRADAASSGVFTIEVLDDDDEMEQAV-----TKTKANNT 270

  Fly   577 SDGATSLENQQLQSTAEFQKIEIQTPTTPRYQNAATTPSSTSTSRYHSAPITPSKPTHMEYPSSN 641
            |.|.:||:::|....               :.| :.:|::....:|.|..:           ::|
  Fly   271 SHGGSSLKSEQEAKV---------------FSN-SQSPTADLPFKYISTDV-----------ATN 308

  Fly   642 GHNSGED--DEIGAFF----------------KAVSMKIRNAQLEPVAF 672
            ...||.|  ||....|                ..|..|::|..:|.:.|
  Fly   309 TDPSGGDLQDEADRMFLLSLMPFLQRLDSRRRLRVRQKLQNVLIEELEF 357

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8765NP_649141.1 MADF 42..123 CDD:214738
MADF 318..405 CDD:214738 21/86 (24%)
CoopNP_001260776.1 MADF 42..124 CDD:214738 21/83 (25%)
BESS 320..353 CDD:281011 4/32 (13%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D98646at50557
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.920

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