DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment tey and rnf220b

DIOPT Version :9

Sequence 1:NP_001137981.1 Gene:tey / 40146 FlyBaseID:FBgn0036899 Length:822 Species:Drosophila melanogaster
Sequence 2:XP_686354.5 Gene:rnf220b / 558091 ZFINID:ZDB-GENE-081104-195 Length:588 Species:Danio rerio


Alignment Length:659 Identity:132/659 - (20%)
Similarity:203/659 - (30%) Gaps:228/659 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   173 NNSQDPRDLRHLHNAGKSHQALATSSSASSSSSSSCSTSNPAISTAT----SSVAVSMASHLAAS 233
            |:|..|..|     ...:...||:::.|...:|..|....|.....|    ..::....|:..||
Zfish    12 NSSYMPSPL-----TSPALMVLASTAEAGRDASIPCQPPRPFGVPVTLEKDMHLSFPSGSYTFAS 71

  Fly   234 SPHHHPHTHAHSHPHPLAHPHAH--------------SHHHVG--HHVGAPPVSTAVTTHHHM-- 280
            ..|..........|.||.|.|..              :|..||  ....:||.......:...  
Zfish    72 MYHRQGGFPTRDFPTPLLHLHPQFAPPNLDCSPLGMLNHGAVGAFRPFSSPPEERDAGLYQSAFL 136

  Fly   281 ------------AHPH------------------PLSHHHAAHHAALASLSMAGLRAVPGGLSLV 315
                        |.||                  |....:|...|..|...:.||          
Zfish   137 PAKRLKGCLDPEASPHLRYTDVEGKDFDFGGARVPAGSPNALKVAEDAGKKLFGL---------- 191

  Fly   316 SGLQAAAAGGAIPE-----------------MCPVCGLKLSAEEWHTHFLTELDRLYK------- 356
            |||  ...|.:.||                 |||:|...|.:.|...|...|::||.:       
Zfish   192 SGL--LVDGSSAPEEHKESSKVKVLYDTQTPMCPICHAVLRSGELQEHMEQEMERLMQMHNSQGP 254

  Fly   357 -----LSAGFERA------SLQATYMFAPPCPAQENAIRTSHNRWETFQRIRNNRQNRLRLKVRK 410
                 ||||..::      ..:.:...:.|.||.| |:.:  :|::||.|:|:|||.||.:|   
Zfish   255 AQKECLSAGPPKSLFSMHIKREGSSSASSPRPADE-AVHS--DRYQTFLRVRSNRQTRLNVK--- 313

  Fly   411 RKYGEMYMMESLYCSSCPICKRKYALETGKIPPEDDAKSQEEIETVDVESCNDEVPDSGSELATP 475
                     |..:|.    |..|:.:::|.:                       .||.|...| |
Zfish   314 ---------ELCWCR----CYAKHKVKSGHV-----------------------WPDCGFPHA-P 341

  Fly   476 SSGSSGTVMPPSSMHNSNSQPGKLDGILYRTGCVLSQKDPHPDEHDVSTNVTTASSSSWPGEAPT 540
            |...|..:   ..:....::..:.||:     ||:..          .:.::......|..:.  
Zfish   342 SCPLSARI---GKLKRRKAEEEQRDGM-----CVVED----------GSVISAGREFEWAEQR-- 386

  Fly   541 QAHISVKTVSELSSTTHHYYNADSCGVGVNDTNSSSSTHNNGGGSNKDLMMDTASCQNDSDEDVI 605
                .::.||.|...                               :.|:..|.....|||.|:.
Zfish   387 ----RIQMVSVLRGF-------------------------------RGLVSSTLKEHQDSDADLD 416

  Fly   606 VDDDDTVKLTSKINYGKIQRRQDEQNV-----GSSRSLENISPVEERPRSEPQVSSTEPGPMDIS 665
            ||.|||      :.|||:|  ..|.:|     ..:|..|....:.....:....|...|....::
Zfish   417 VDGDDT------LEYGKVQ--YTEADVIPCLGNEARDAEERQALRGAILNGDTTSRFSPEQTKLA 473

  Fly   666 HNNNNNNNNNNNNSNSNNNNNPSTKYAESMENS----LSQLSSMGVPGLTQLDTKV-GISSDLKP 725
                  |:.....||...:||.||....:.:||    ||...|:..  |..|.|:: .:...|..
Zfish   474 ------NSETPTTSNGEGDNNLSTTSPRTCKNSELEILSDDPSLNT--LEALKTRIRDLEKQLTR 530

  Fly   726 DDENKCFIC 734
            .|..||.||
Zfish   531 GDRFKCLIC 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
teyNP_001137981.1 RNF220 328..>459 CDD:292548 37/165 (22%)
rnf220bXP_686354.5 RNF220 215..463 CDD:292548 69/353 (20%)
zf-C3HC4_2 536..574 CDD:290634 3/4 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 40 1.000 Domainoid score I12526
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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