DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oat and gabT

DIOPT Version :10

Sequence 1:NP_649139.1 Gene:Oat / 40145 FlyBaseID:FBgn0022774 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_417148.1 Gene:gabT / 948067 ECOCYCID:EG10361 Length:426 Species:Escherichia coli


Alignment Length:431 Identity:131/431 - (30%)
Similarity:212/431 - (49%) Gaps:54/431 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 SRSELVYARENKY--GAHNYHPLPVALTKGEGVFVWDVEGKRYFDYLSAYSAVNQGHCHPKIVAA 94
            |..||:..|....  |....|  |:...:.|...||||||:.|.|:....:.:|.||.|||:|||
E. coli     3 SNKELMQRRSQAIPRGVGQIH--PIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAA 65

  Fly    95 LTAQASKLALTSRAFYSDVLGEYEEYV-------TKLFG--FDKVLPMNTGVEGGETACKLARKW 150
            :.||..||:.|.    ..||. ||.|:       .|:.|  ..|.|.:.||.|..|.|.|:||  
E. coli    66 VEAQLKKLSHTC----FQVLA-YEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIAR-- 123

  Fly   151 GYLEKKIPANQAKIIFARNNFWGRTLSAVSASNDPSSYEGFGPFMPG-----------FELIEYD 204
                  ....::..|.....:.|||...::.:...:.|......|||           ..:.|.|
E. coli   124 ------AATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDD 182

  Fly   205 NVSALEESLKD----PNVCAFMVEPIQGEAGVVVPSDGYLKKVRELCTKYNVLWIADEVQTGLAR 265
            .::::....|:    .::.|.::||:|||.|....|..:::::|.||.::.::.||||||:|..|
E. coli   183 AIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGR 247

  Fly   266 TGKLLAVDYEQVQPDILILGKALSGGMYPVSAVLCNDQVMLCIKPGEHGSTYGGNPLGCRVAMAA 330
            ||.|.|::...|.||:....|:::|| :|::.|....:||..:.||..|.||.|||:.|..|:..
E. coli   248 TGTLFAMEQMGVAPDLTTFAKSIAGG-FPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEV 311

  Fly   331 LEVLQEEKLAENAFKMGDLLRNELSTLPK--DVVSVVRGKGLLNAIVI-----NQKFDA---WEV 385
            |:|.::|.|.:.|..:|..|::.|..:.:  ..:..|||.|.:.||.:     :.|.||   .|:
E. coli   312 LKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEI 376

  Fly   386 CLRLKENG--LLAKPTHGDIIRFAPPLVINETQMRESIDII 424
            ..|.::.|  ||:...:.:::|...||.|.:.|:|:.::||
E. coli   377 VARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEII 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OatNP_649139.1 Orn_aminotrans 34..429 CDD:273853 130/429 (30%)
gabTNP_417148.1 PRK08088 1..425 CDD:236149 131/431 (30%)

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