DRSC/TRiP Functional Genomics Resources

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Protein Alignment Oat and patA

DIOPT Version :10

Sequence 1:NP_649139.1 Gene:Oat / 40145 FlyBaseID:FBgn0022774 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_417544.5 Gene:patA / 947120 ECOCYCID:G7596 Length:459 Species:Escherichia coli


Alignment Length:452 Identity:145/452 - (32%)
Similarity:220/452 - (48%) Gaps:45/452 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 ATRMSFLAQKTASQETTAAAGSRSELVYAREN-KYGAHNYHPLPVALTKG--EGVFVW------- 65
            |..::.:.::|...|...|. :|..:.|.:|: ..|...|..   ::|.|  .|...|       
E. coli    15 AHALNLIEKRTLDHEEMKAL-NREVIEYFKEHVNPGFLEYRK---SVTAGGDYGAVEWQAGSLNT 75

  Fly    66 --DVEGKRYFDYLSAYSAVNQGHCHPKIVAALTAQASKLALTS-------RAFYSDVLGEYEEYV 121
              |.:|:.:.|.|..:...|.||.:|.:|:|:..|.:|..|.|       ||..:..|.......
E. coli    76 LVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGK 140

  Fly   122 TKLFGFDKVLPMNTGVEGGETACKLARKWGYLEKKIPANQAKIIFARNNFWGRTLSAVSASNDPS 186
            .|...|     .|:|.|..|.|.|||:.:     :.|..:...|.....|.|::|.|:||:...:
E. coli   141 LKYSFF-----CNSGTESVEAALKLAKAY-----QSPRGKFTFIATSGAFHGKSLGALSATAKST 195

  Fly   187 SYEGFGPFMPGFELIEYDNVSALEESLKD-----PNVCAFMVEPIQGEAGVVVPSDGYLKKVREL 246
            ..:.|.|.:|||..:.:.|:.|:..:|.:     .:|.|.::||||||.||::|..|||..||:|
E. coli   196 FRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKL 260

  Fly   247 CTKYNVLWIADEVQTGLARTGKLLAVDYEQVQPDILILGKALSGGMYPVSAVLCNDQV--MLCIK 309
            |.::..|.|.||||||:.||||:.|.::|.||||||.|.|||.||:.|:.|.:..::|  :|...
E. coli   261 CDEFGALMILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDN 325

  Fly   310 PGEHGSTYGGNPLGCRVAMAALEVLQEEKLAENAFKMGDLLRNELSTLPK---DVVSVVRGKGLL 371
            |..|.:|:|||||.|..|:|.:.||.|:.|...|.:.||:|.:....|.:   |:|...||||:|
E. coli   326 PFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGML 390

  Fly   372 NAIVINQKFDAWEVCLRLKENGLLAKPT--HGDIIRFAPPLVINETQMRESIDIIRKTILSM 431
            .||........:.....:....:|...|  :...||..|||.:...|....|...||.:.:|
E. coli   391 MAIEFVDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAAM 452

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OatNP_649139.1 Orn_aminotrans 34..429 CDD:273853 139/425 (33%)
patANP_417544.5 PRK11522 1..459 CDD:183175 145/452 (32%)

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