DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oat and DELTA-OAT

DIOPT Version :9

Sequence 1:NP_649139.1 Gene:Oat / 40145 FlyBaseID:FBgn0022774 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_199430.1 Gene:DELTA-OAT / 834660 AraportID:AT5G46180 Length:475 Species:Arabidopsis thaliana


Alignment Length:414 Identity:215/414 - (51%)
Similarity:291/414 - (70%) Gaps:9/414 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 QETTAAAGSRSELVYARENKYGAHNYHPLPVALTKGEGVFVWDVEGKRYFDYLSAYSAVNQGHCH 88
            |..:.:..|.|:.:...|:::.||||||:||..::..|..:||.|||||.|:|:|||||||||||
plant    30 QSNSKSPPSSSQRLMELESEFSAHNYHPVPVVFSRANGSTIWDPEGKRYIDFLAAYSAVNQGHCH 94

  Fly    89 PKIVAALTAQASKLALTSRAFYSDVLGEYEEYVTKLFGFDKVLPMNTGVEGGETACKLARKWGYL 153
            |||:.||..|..||.|:|||||:|....:.|.:|.:||:|.|||||||.||.|||.|||||||:.
plant    95 PKIMKALQEQVEKLTLSSRAFYNDKFPVFAERLTNMFGYDMVLPMNTGAEGVETALKLARKWGHE 159

  Fly   154 EKKIPANQAKIIFARNNFWGRTLSAVSASNDPSSYEGFGPFMPGFELIEYDNVSALEESLKD--P 216
            :|.||.::|.|:.....|.||||:.||.|.|..:..||||.:||...:::.:..:||:..|:  .
plant   160 KKNIPKDEAIIVSCCGCFHGRTLAIVSMSCDNDATRGFGPLLPGNLKVDFGDADSLEKIFKEKGD 224

  Fly   217 NVCAFMVEPIQGEAGVVVPSDGYLKKVRELCTKYNVLWIADEVQTGLARTGKLLAVDYEQVQPDI 281
            .:..|:.|||||||||::|.|||||.|||||||||||.||||||:||||:||:||.|:|:::||:
plant   225 RIAGFLFEPIQGEAGVIIPPDGYLKAVRELCTKYNVLMIADEVQSGLARSGKMLACDWEEIRPDM 289

  Fly   282 LILGKALSGGMYPVSAVLCNDQVMLCIKPGEHGSTYGGNPLGCRVAMAALEVLQEEKLAENAFKM 346
            :||||||.||:.||||||.:..|||.||||:||||:|||||...||||:|:|:.||||.|.:..:
plant   290 VILGKALGGGVIPVSAVLADKDVMLHIKPGQHGSTFGGNPLASAVAMASLDVIVEEKLVERSASL 354

  Fly   347 GDLLRNELSTLPKD---VVSVVRGKGLLNAIVINQK----FDAWEVCLRLKENGLLAKPTHGDII 404
            |:.||.:|:.:.|.   .:..|||:||.|||..|.:    ..|:::||.|||.|:||||||..|:
plant   355 GEELRIQLNEIKKQFPKYIKEVRGRGLFNAIEFNSESLSPVSAYDICLSLKERGVLAKPTHNTIV 419

  Fly   405 RFAPPLVINETQMRESIDIIRKTI 428
            |..|||.|:..::|:..:.:...:
plant   420 RLTPPLSISSDELRDGSEALHDVL 443

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OatNP_649139.1 Orn_aminotrans 34..429 CDD:273853 213/404 (53%)
argD 48..428 CDD:273228 209/388 (54%)
DELTA-OATNP_199430.1 PLN02624 1..475 CDD:215335 215/414 (52%)
GabT 52..444 CDD:223238 211/392 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 426 1.000 Domainoid score I112
eggNOG 1 0.900 - - E1_COG4992
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H231
Inparanoid 1 1.050 433 1.000 Inparanoid score I416
OMA 1 1.010 - - QHG63155
OrthoDB 1 1.010 - - D145181at2759
OrthoFinder 1 1.000 - - FOG0001891
OrthoInspector 1 1.000 - - oto3514
orthoMCL 1 0.900 - - OOG6_100416
Panther 1 1.100 - - LDO PTHR11986
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1247
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.