DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oat and agxt2

DIOPT Version :9

Sequence 1:NP_649139.1 Gene:Oat / 40145 FlyBaseID:FBgn0022774 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001028922.1 Gene:agxt2 / 619269 ZFINID:ZDB-GENE-050913-100 Length:517 Species:Danio rerio


Alignment Length:502 Identity:128/502 - (25%)
Similarity:208/502 - (41%) Gaps:113/502 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LAQKTASQETTAA---------------AGSRSELVYARENKYGAHNYHPL---------PVALT 57
            |.||||.:..:|.               ..|:..|:..|:     ||.:|:         ||.:.
Zfish    36 LCQKTAVKHPSAVLPQIPPRDFKPEPYQGMSKERLLDIRK-----HNCNPMTMKVTYYKKPVFIN 95

  Fly    58 KGEGVFVWDVEGKRYFDYLSAYSAVNQGHCHPKIVAALTAQASKLALTSRAFYSDVLGEYEEYVT 122
            :|...::|||:|:||.|..:..:.|:.|||:||:..|...|..:|..|:..:   |..:.:||..
Zfish    96 QGHMQWLWDVDGRRYLDLFAGVATVSVGHCNPKVTEAAEKQLRRLWHTTPIY---VYPQIQEYAE 157

  Fly   123 KLFGFDKVLP--------MNTGVEGGETACKLARKWGYLEKKIPANQAKIIFARNNFWGRTLSAV 179
            ||.   .:||        .|:|.|..:.|..:||        :.......|..|.::.|.:..|.
Zfish   158 KLV---SLLPDPLKVVYFTNSGSEANDLAVLMAR--------LHTGNFDAITLRGSYHGGSPQAT 211

  Fly   180 SASND-------PSSYEGFGPFMP-------GFELIEYDNVSALEESLKDPNVC----------- 219
            ...::       |||........|       |........|..:.|....|..|           
Zfish   212 GLMSNTHYKYPVPSSLGCHNTMCPDVFRGLWGGSHCRDSPVQTIRECSCSPGHCYANDMYIKELK 276

  Fly   220 ------------AFMVEPIQGEAGVVVPSDGYLKKVRELCTKYNVLWIADEVQTGLARTGK-LLA 271
                        ||..|||||..|.|.....|||:..:|..:...:.||||||||..|||. ...
Zfish   277 EVFDTTVPSRIAAFFTEPIQGVGGAVQYPKNYLKETYQLVREKGGICIADEVQTGFGRTGSHFWG 341

  Fly   272 VDYEQVQPDILILGKALSGGMYPVSAVLCNDQVMLCIKPGEHGSTYGGNPLGCRVAMAALEVLQE 336
            .:...|.||::.:.|.::.|: |:.||:...::......|.|.:|:|||||.|.:|.:.|:.::|
Zfish   342 FEGHNVIPDMVTMAKGIANGI-PMGAVVTTAEIARSFAKGVHFNTFGGNPLACAIASSVLDTIKE 405

  Fly   337 EKLAENAFKMGDLLRNELSTL--PKDVVSVVRGKGL---------------LNAIVINQKF-DAW 383
            :|:.||:.::|..|..||:.|  ..:::..||||||               |....:|:.| |..
Zfish   406 DKMQENSAELGTYLLTELAKLRDKYEIIGDVRGKGLQIGVEMVKDKASRTPLPQEAMNEIFEDTK 470

  Fly   384 EVCLRLKENGLLAKPTHGDIIRFAPPLVINETQMRESIDIIRKTILS 430
            ::.:.:.:.||     :|...|..||:.|.:......:.:..:.:|:
Zfish   471 DMGVLIGKGGL-----YGQTFRIKPPMCITKADADFFLSVFNQAVLN 512

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OatNP_649139.1 Orn_aminotrans 34..429 CDD:273853 120/467 (26%)
argD 48..428 CDD:273228 117/452 (26%)
agxt2NP_001028922.1 GabT 65..510 CDD:223238 121/469 (26%)
OAT_like 73..510 CDD:99735 119/461 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145181at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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