DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Oat and oat

DIOPT Version :9

Sequence 1:NP_649139.1 Gene:Oat / 40145 FlyBaseID:FBgn0022774 Length:431 Species:Drosophila melanogaster
Sequence 2:NP_001016936.1 Gene:oat / 549690 XenbaseID:XB-GENE-5969095 Length:439 Species:Xenopus tropicalis


Alignment Length:438 Identity:314/438 - (71%)
Similarity:368/438 - (84%) Gaps:8/438 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFAKLSAR---GI---ATRMSFLAQKTASQETTAAAGSRSELVYARENKYGAHNYHPLPVALTKG 59
            |.:||..|   |:   ..::|..:..||:.|..|.....||.|:.||:||||||||||||||.:|
 Frog     1 MLSKLIQRRTLGVFYGNVKVSMSSATTAATEKPADEALSSECVFERESKYGAHNYHPLPVALERG 65

  Fly    60 EGVFVWDVEGKRYFDYLSAYSAVNQGHCHPKIVAALTAQASKLALTSRAFYSDVLGEYEEYVTKL 124
            :||:||||||:||||:||||||||||||||||:.||.|||.||.|||||||:|||||||||||||
 Frog    66 KGVYVWDVEGRRYFDFLSAYSAVNQGHCHPKILNALKAQADKLTLTSRAFYNDVLGEYEEYVTKL 130

  Fly   125 FGFDKVLPMNTGVEGGETACKLARKWGYLEKKIPANQAKIIFARNNFWGRTLSAVSASNDPSSYE 189
            ||::||||||||||||||||||||||.|..|.||..:|:||||..||||||:||:|:|.||||||
 Frog   131 FGYNKVLPMNTGVEGGETACKLARKWAYTVKGIPKYKAQIIFAAGNFWGRTMSAISSSTDPSSYE 195

  Fly   190 GFGPFMPGFELIEYDNVSALEESLKDPNVCAFMVEPIQGEAGVVVPSDGYLKKVRELCTKYNVLW 254
            |||||||||::|.|:::.|||.:|:||||.|||||||||||||:||.||||..||:|||.:|||:
 Frog   196 GFGPFMPGFKIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVIVPDDGYLTGVRQLCTAHNVLF 260

  Fly   255 IADEVQTGLARTGKLLAVDYEQVQPDILILGKALSGGMYPVSAVLCNDQVMLCIKPGEHGSTYGG 319
            ||||||||||||||:||||:|.|:|||:|||||||||:||||||||:|:|||.||||||||||||
 Frog   261 IADEVQTGLARTGKMLAVDHENVRPDIVILGKALSGGVYPVSAVLCDDEVMLTIKPGEHGSTYGG 325

  Fly   320 NPLGCRVAMAALEVLQEEKLAENAFKMGDLLRNELSTLPKDVVSVVRGKGLLNAIVINQK--FDA 382
            |||.||||||:|||::||||||||..||:|||.||...|.|:|:.||||||||||||.:.  .||
 Frog   326 NPLACRVAMASLEVIEEEKLAENATAMGELLRAELMKTPSDIVTAVRGKGLLNAIVIKESKDCDA 390

  Fly   383 WEVCLRLKENGLLAKPTHGDIIRFAPPLVINETQMRESIDIIRKTILS 430
            |:|||||::||||||||||||||.||||.|.|.::||..:||.||:||
 Frog   391 WKVCLRLRDNGLLAKPTHGDIIRLAPPLTIKEDEIRECTEIIHKTLLS 438

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OatNP_649139.1 Orn_aminotrans 34..429 CDD:273853 302/396 (76%)
argD 48..428 CDD:273228 291/381 (76%)
oatNP_001016936.1 Orn_aminotrans 40..437 CDD:273853 302/396 (76%)
argD 54..436 CDD:273228 291/381 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 601 1.000 Domainoid score I197
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H231
Inparanoid 1 1.050 627 1.000 Inparanoid score I842
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D145181at2759
OrthoFinder 1 1.000 - - FOG0001891
OrthoInspector 1 1.000 - - oto103890
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R858
SonicParanoid 1 1.000 - - X1247
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

Return to query results.
Submit another query.